Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02023 ATGGATAATACATATGATGTTTTGGTTGTTAAGTTGGATGATGAGAATGACCCTAGTTATGATGTTGGTCATCATGAAAGTATTAGTGCAGATCCCTCAGATAATAGAGAACAGAGCCAGCCTGCAGATATGGATGTTGGAGATGGGCAGTATAAGAGGATAGCAAATCTGACCGGTGATGATGTAAGGGGTTTGGAGTTTGTAACTCAGCATGCTGCTTTCAAATTTTACGAGGAATATGCTAAAGCCCATGGTTTTGTAGTAAGAAAAGATGATATAAGGAAGGATTTTAGGGGTAACATTATGATGCGACAATTTGTATGCAATAGACAAGGATTGAGAAACAAAAAGCATTTCTTGAGGGTAGATAGGAAAAGGGAGCACAAAGCAATTACCCAAACAAATTGTGCAACTAAGCTTCGGGTACGTTTCAATCGCAAGAAATCAAAATGGATAGTGGTGTCTTTTGAGGAGGCACATAATCACGAGCTAACCCCTTTAGTATATGTGCATTTATATCCTGCTTATCGTAAAATGAGTGATGAAGATAAAGCTCAGGTTGATAGTTTACGTGCCCATGGTATTAGAACTTGTCACATTATTGGCTACATGTTGGCCCAAAAAGGCGAATATGGTTGTTTAGGTTTTTGTAGAACAGATGTATACAACTATATTGACAGCAAAAGTCGTGAGCAAGTAAAAGATGGTGATGCAATTGTTGCTTTAAGCTATTTAGTAGGTAAGGCACAACATGATCCAACATTATTTGCACAATTCCAAATCACAACAAAAGGTAAATTAAGACATATATTTTGGGCAGATGGAACTAGTATATCCGATTATCAATGTAGCATTGTTGAATTCATGCATAGCTTTGAACAAGATTTGAGGGAATACAGACACAATGAATTGACTGCGGATTTTAAGTCATTGTTTTCTGAACCAGTATTGACAACATGTTTTCAGAAAATTGAGAGAGACGCTTCAAATATTTACACTTTGGAGATGTTTAAAGAAGTTAGGTAG 1026 0.3665 MDNTYDVLVVKLDDENDPSYDVGHHESISADPSDNREQSQPADMDVGDGQYKRIANLTGDDVRGLEFVTQHAAFKFYEEYAKAHGFVVRKDDIRKDFRGNIMMRQFVCNRQGLRNKKHFLRVDRKREHKAITQTNCATKLRVRFNRKKSKWIVVSFEEAHNHELTPLVYVHLYPAYRKMSDEDKAQVDSLRAHGIRTCHIIGYMLAQKGEYGCLGFCRTDVYNYIDSKSREQVKDGDAIVALSYLVGKAQHDPTLFAQFQITTKGKLRHIFWADGTSISDYQCSIVEFMHSFEQDLREYRHNELTADFKSLFSEPVLTTCFQKIERDASNIYTLEMFKEVR. 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02023 341 MobiDBLite consensus disorder prediction 15 32 - -
Seca8g02023 341 MobiDBLite consensus disorder prediction 15 48 - -
Seca8g02023 341 PANTHER OS01G0519700 PROTEIN 282 341 - -
Seca8g02023 341 Pfam FAR1 DNA-binding domain 75 165 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02023 Seca-Chr8 43042380 43043405 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca8g02023 FAR1 2.7e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02023 - - ccaj:109792835 329.717