Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02010 ATGGAAGGTGGTTCCATTACCATTAGCTTTCTTAAATCACAATGCAATGAGGAATCAAAGAAGAGTCTAAAAAGAAAACGTGAGAATCAAGGCAATGTCGCTAACAAGAATTGCAAGACAAATAACAACAGCAACATTGCTAATGTTAATGATGTTATTCTTGACCAACCGGTTGGATTGCCAATGACATTCCAAGAAAAGATTCAAGAAATGGGAGGCCGTGAGGTGAAGTTGGTGATCCAAAAACAGCTCTTTAAGAGTGATCTGAACTCTAATAATGGAAGGTTCTCCATCCCAATACAACAAATTCGACATGATGCAAGGGATTTCTTGACAGAGACAGATGAATTCTATTTGAAAGTGCGTAAAGGTGAAGGAAAAAACCAAAGGCTTGTTGGTTTTCCAGTGTCTGTGTTGGATCCAAGTCTTAAACTTTACAACATGTGCTTCAAGAAATGGAAGATGGAACACACAGAGGTGTACAATATAACTAGTGGATGGAACGACCTTGTGAGAAATAATTGTTTGAAAGCCAAAGATACAGTGCAGTTGTGGTCTTTCAGAAGCAACAATAATCAGTTGTGTTTTGCACTCGTCAAGCTTTAA 606 0.3812 MEGGSITISFLKSQCNEESKKSLKRKRENQGNVANKNCKTNNNSNIANVNDVILDQPVGLPMTFQEKIQEMGGREVKLVIQKQLFKSDLNSNNGRFSIPIQQIRHDARDFLTETDEFYLKVRKGEGKNQRLVGFPVSVLDPSLKLYNMCFKKWKMEHTEVYNITSGWNDLVRNNCLKAKDTVQLWSFRSNNNQLCFALVKL. 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02010 201 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 15 201 IPR005508 GO:0003677
Seca8g02010 201 MobiDBLite consensus disorder prediction 19 39 - -
Seca8g02010 201 Pfam B3 domain-containing protein At2g31720-like 68 172 IPR005508 GO:0003677
Seca8g02010 201 CDD B3_DNA 80 192 IPR003340 GO:0003677
Seca8g02010 201 ProSiteProfiles B3 DNA-binding domain profile. 151 201 IPR003340 GO:0003677
Seca8g02010 201 Gene3D - 63 200 IPR015300 -
Seca8g02010 201 SUPERFAMILY DNA-binding pseudobarrel domain 79 193 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02010 Seca-Chr8 42665595 42666200 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g02010 64 198 B3 DNA Binding Superfamily AT1G05930 26.471 8.42e-11 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02010 - - tpra:123920509 157.918