Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01989 ATGACTTATGCTCCTGGTCTTCCATTGGCTATAGAAGTAATAGGTTCCCAATTGTTTGAAAAAAGTGTAGAAGAATGGAAATCTGCATTAGATCAATATGAAAGGATTCCTAGTAAAGAGATCCAAGAGGTACTTAAAGTAAGCTTTGATGCTTTGGAAGATGAACAACAAAGTGTTTTTCTTGACATTGCTTGTTTCTTCAAAGGATATAATTTGAAAGAGGTCGAAGAGATACTTCATGCACGTCATGAGGACATGGGTAAGGAAATTGTTCGACAAGAATCACCAAAAGAGCCTGGAAACCGTAGTAGGTTATGA 318 0.3679 MTYAPGLPLAIEVIGSQLFEKSVEEWKSALDQYERIPSKEIQEVLKVSFDALEDEQQSVFLDIACFFKGYNLKEVEEILHARHEDMGKEIVRQESPKEPGNRSRL. 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01989 105 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 63 IPR027417 -
Seca8g01989 105 Gene3D - 1 53 IPR042197 -
Seca8g01989 105 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 105 IPR044974 GO:0006952
Seca8g01989 105 MobiDBLite consensus disorder prediction 86 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01989 Seca-Chr8 42044297 42044705 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01989 1 105 WRKY Transcription Factor Family AT5G45050 28.148 1.43e-11 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01989 - - lja:Lj0g3v0331339.3 147.517