Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01974 ATGGAATTTGAGTCTATTGAGAAAGTTAGAGAGTTTTATAAATCTTTTGCTAAAAAAAGGGGTTTTGGAGTACGTATTCGTTCAACTAAACCAAATAGAGCAGTTTTGGTATGTTGCAATGAAAGTCAACACCAAATGAAAAGCTCTGGATGTGAAGAAATTCAAGATAACACCAGTAAGACTAAAAGAAAATGTTCAACCACCCGAAGTGGTTGTCAAGCTTCACTATCCCTTTCAGAGGTATCAACCAAGCATTCCATTACCTACCTTGTTGGCAATTTTATCGTCTTATTCTTTTCCTCAAACATAATTCAAAAACTCCAGTATCATGGCTCTACAGTAACAATGAGTTAA 354 0.3503 MEFESIEKVREFYKSFAKKRGFGVRIRSTKPNRAVLVCCNESQHQMKSSGCEEIQDNTSKTKRKCSTTRSGCQASLSLSEVSTKHSITYLVGNFIVLFFSSNIIQKLQYHGSTVTMS. 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01974 117 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 1 91 - -
Seca8g01974 117 Pfam FAR1 DNA-binding domain 11 83 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01974 Seca-Chr8 41769960 41770313 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca8g01974 FAR1 1.5e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01974 - K17604 tpra:123886791 122.094