Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01973 ATGGCCATAAGCACTCCAGGCATCATAGTGATTCGCATAAGTTCTGGCTCACTCTGCTTTGCAAATGCCAATTTTGTCAGAGAAAGAATACTGAAGTGGGTCATGGAGGAAGGAGATGACCTTCAAGAATCTACTAAAGGAAAAGTGAAAGCAGTTATTTTGGACATGACAAACCTGATGAATGTTGATACTTCTGGAATTCTAGCACTTGAGGAACTGCACAAGAGGTTGCATTCACGCGGCGTAGAATTAGCTATGGTCAACCCGAGGTGGCTAGTAATTCACAAGCTTAAGGTTGCACACTTTGTGGACAAAATTGGAAAAGAATGGGTTTTCCTTACTGTTGGAGAAGCCTTAGACGCATGTCTCTCTTCTAAAATTGCTACCGCTTGA 393 0.4249 MAISTPGIIVIRISSGSLCFANANFVRERILKWVMEEGDDLQESTKGKVKAVILDMTNLMNVDTSGILALEELHKRLHSRGVELAMVNPRWLVIHKLKVAHFVDKIGKEWVFLTVGEALDACLSSKIATA. 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01973 130 PANTHER SULFATE TRANSPORTER 6 123 IPR001902 GO:0016020|GO:0055085
Seca8g01973 130 FunFam Sulfate transporter 31 1 125 - -
Seca8g01973 130 ProSiteProfiles STAS domain profile. 1 122 IPR002645 -
Seca8g01973 130 CDD STAS_SulP_like_sulfate_transporter 2 115 - -
Seca8g01973 130 SUPERFAMILY SpoIIaa-like 6 122 IPR036513 -
Seca8g01973 130 Gene3D STAS domain 1 127 IPR036513 -
Seca8g01973 130 Pfam STAS domain 4 118 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01973 Seca-Chr8 41756158 41757505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01973 1 127 Inorganic Solute Cotransporters AT5G10180 53.488 1.87e-38 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01973 K17469 - gmx:100776591 233.032