Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01899 ATGGGAAGCGAAGGCGAGAACAGTGTAAGGAAACCAAGGTTCCTGTGCCTTCATGGGTTCCGAACAAGTGCAGAAATACTCAAGAAACAGGTTTACAACAAGTGGCCCCAAACCGTGCTAGATAGCCTCGATCTCGTCTTTCTGGATGCATCTTTTCCTTGCCAGGGTAAATCTGACGTTGAAGGCATTTTCGATCCTCCTTACTACGAGTGGTTTCAGTTTAACAAGGAATTCACAGAGTACACCAATTTTTATGAGTGTTTGCAATATATTGAGGATTACATGATCAAGCATGGACCTTTTGATGGTCTTCTAGGTTTTTCACAGGGGGCGATATTGGCAGCTGGGTTGCCAGGTCTTCAGGAGAAGGGCGTGGCACTCACGAAGGTTCCCAAAGTGAAATTTCTGATAATAATAGGAGGGGCCAAGTTCAGGTCACCTTCAGTGGTGGAAAAAGCATATTCTTCCCCTATTAGCTGCCCCTCCCTTCACTTTCTAGGTGAGACAGATTTTTTGAGGCAGTATGGAAATGAACTATTAGAATCCTGTGTTGAACCTGTGGTGATTCATCACCCAAAAGGACACACAATACCAAGATTAGATGATGAGAGCTTGAAGACCATGATGAATTTCATTGAAAGAATTCAAAAAGATATTTGA 660 0.4318 MGSEGENSVRKPRFLCLHGFRTSAEILKKQVYNKWPQTVLDSLDLVFLDASFPCQGKSDVEGIFDPPYYEWFQFNKEFTEYTNFYECLQYIEDYMIKHGPFDGLLGFSQGAILAAGLPGLQEKGVALTKVPKVKFLIIIGGAKFRSPSVVEKAYSSPISCPSLHFLGETDFLRQYGNELLESCVEPVVIHHPKGHTIPRLDDESLKTMMNFIERIQKDI. 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01899 219 Gene3D alpha/beta hydrolase 8 218 IPR029058 -
Seca8g01899 219 PANTHER OVARIAN CANCER GENE-2 PROTEIN-RELATED 7 217 - -
Seca8g01899 219 FunFam esterase AGAP003155 8 219 - -
Seca8g01899 219 Pfam Serine hydrolase (FSH1) 10 202 IPR005645 -
Seca8g01899 219 SUPERFAMILY alpha/beta-Hydrolases 10 213 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01899 Seca-Chr8 39346873 39350679 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01899 3 198 Sulfurtransferasese or Rhodanese AT1G09280 29.825 1.66e-18 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01899 - - lja:Lj1g3v0244710.1 399.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g01899 8 39346873 39350679 Seca8g01899 8 39346873 39350679 ECH