Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01875 ATGGTGTGCCAAGCAGCAAGTCAAACCAGATTTAGGGCATTGAAACATGAGAATGGAACTGCAGGGTGCTCCACCATTATAGTTAGAGTTATAGCATGCTTTCAACCACTCAGAGAATGCCAGGCTGAATATTTCCGTCATTTGCTCAAACCTGTGATTGTTGTGATTGAATGGGAGAAGATTGCAGAACCTGGACACCCCAGTTCTTTTGGTGCTCCCCTTAATGTGGGGAAGCAAAATGCTACTTCTGCAGCAGCTATGAACCCGGGTGTGAATATGGTCACAAGAAATGAGAAAGTGCCAGCATATGCGTCCTCTTCGCTGCCTCATTTACAGTTAGGACGCGGTTCTAATGAACCTCATGGTTGGTTTTATTGTTTACCTCGCTTCCGACAGGGATTTACCCCTGCTCCAAACTTCCCTGCTGAGGCAAAACCCCCTGCTGGCCATGTGAAAAGTGTTAGGGGGGAAATTGCACCCAATGGAGATTCTAGTTTCCCTCAGAAGCAATTCTTGGTCATTGACCAAACGGGTGATCAAACAACCCTCATTTATAGCTCAAGGTTTGGGAGTCCTGTTGAGTGCCTTGCTTCCTTGGATTCAAAATTGCATGGTTCTAACAATTTGAATGGGATTAACAATGAGCCTTCTTTAAGAAGAGATCTGAATCATGTGGTTGGACCAACTTTTGAAGATGATAAAGTTGATGGAAATCAAGGGACTGAGACTGAGAGTGAGATGCATGAAGACACAGAAGAAATCAATGCATTGCTTTACTCTGATAGTGATGGTTATTCAACTGAGGATGATGATGATGATGAAGTTACTAGCACAGGGCATTCGCCTAGTACAATGACCACTCATGATAACCAGGAACCGTGCCAAGGAACCACAGAAGAAGTTGCTAGCTCCTATGGTGGAGCCACAAAGAAGAGGAAGCGATTCGATGGGGCTTGTGATGTTAATGAGACGCAGTTCATGGACACTGCCAGTTCTCTGAATCAAAACCGACCCTTTGATATGGGAGATGATGATGCAGAATCAAGATGCTCTAGTGGCAACTACAGTCAAGAAGGGTCAGGTGAAATGGGTTTCTTCCCTGGAAACAAGAAGATGAGAAAGGAGAAGATACAAGATGTTCTAAGCATTCTTCAATGCATAGTTCCTGGTGGGAAAGACAAGGACCCAATCCAGCTTCTTGATGAAGCCATTCGTTGCTTGAAATCCTTGAAACTCAAGGCTAGAGCTCTTGGGCTCAATGCCTTGTAA 1269 0.446 MVCQAASQTRFRALKHENGTAGCSTIIVRVIACFQPLRECQAEYFRHLLKPVIVVIEWEKIAEPGHPSSFGAPLNVGKQNATSAAAMNPGVNMVTRNEKVPAYASSSLPHLQLGRGSNEPHGWFYCLPRFRQGFTPAPNFPAEAKPPAGHVKSVRGEIAPNGDSSFPQKQFLVIDQTGDQTTLIYSSRFGSPVECLASLDSKLHGSNNLNGINNEPSLRRDLNHVVGPTFEDDKVDGNQGTETESEMHEDTEEINALLYSDSDGYSTEDDDDDEVTSTGHSPSTMTTHDNQEPCQGTTEEVASSYGGATKKRKRFDGACDVNETQFMDTASSLNQNRPFDMGDDDAESRCSSGNYSQEGSGEMGFFPGNKKMRKEKIQDVLSILQCIVPGGKDKDPIQLLDEAIRCLKSLKLKARALGLNAL. 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01875 422 MobiDBLite consensus disorder prediction 329 364 - -
Seca8g01875 422 MobiDBLite consensus disorder prediction 278 304 - -
Seca8g01875 422 PANTHER TRANSCRIPTION FACTOR BHLH145 67 420 IPR037546 -
Seca8g01875 422 MobiDBLite consensus disorder prediction 228 255 - -
Seca8g01875 422 MobiDBLite consensus disorder prediction 228 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01875 Seca-Chr8 38809459 38811105 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01875 73 411 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G09460 31.686 1.76e-24 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01875 - - tpra:123920090 463.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01584 4 25702772 25704960 Seca8g01875 8 38809459 38811105 PCT