Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01871 ATGATGTGGGAATGGGAAGATGAATTGAACGACGATTCCACCTCTACACCCGAACAAGAACAAGAACAACCTTACCCTGATTCCTATCTCAATTTCGATTTCTTCTCTGCTCTCTCCAAGCCCAAGGATTATTACAAGATATTGGAAGTGGATTATGATGCTACTGATGATACTATTCGCTCCAATTACATTCGTCTTGCTCTGAAATGGCACCCGGATAAGCAAAAAGACCAAGATTCCGCTACTTCACGGTTTCAAGAGATAAACGAGGCTTATCAGGCCAGTAGGAGTATTTGTTGA 300 0.42 MMWEWEDELNDDSTSTPEQEQEQPYPDSYLNFDFFSALSKPKDYYKILEVDYDATDDTIRSNYIRLALKWHPDKQKDQDSATSRFQEINEAYQASRSIC. 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01871 99 MobiDBLite consensus disorder prediction 1 15 - -
Seca8g01871 99 SUPERFAMILY Chaperone J-domain 35 93 IPR036869 -
Seca8g01871 99 MobiDBLite consensus disorder prediction 1 27 - -
Seca8g01871 99 Pfam DnaJ domain 43 93 IPR001623 -
Seca8g01871 99 PRINTS DnaJ domain signature 63 78 IPR001623 -
Seca8g01871 99 PRINTS DnaJ domain signature 80 99 IPR001623 -
Seca8g01871 99 PRINTS DnaJ domain signature 45 63 IPR001623 -
Seca8g01871 99 SMART dnaj_3 42 97 IPR001623 -
Seca8g01871 99 CDD DnaJ 43 93 IPR001623 -
Seca8g01871 99 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 93 - -
Seca8g01871 99 Gene3D DnaJ domain 35 96 IPR036869 -
Seca8g01871 99 ProSiteProfiles dnaJ domain profile. 43 99 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01871 Seca-Chr8 38637638 38641602 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01871 36 94 C2H2 Transcription Factor Family AT1G74250 37.500 1.77e-07 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01871 - - qsu:112005211 148.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g01871 8 38637638 38641602 Seca8g01871 8 38637638 38641602 ECH