Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01841 ATGTTTAATTTTATTATAATTGTGGATATAGGATGCAAAGGTGTCAAGGGTGCACAACCTGGTCTAGTTCTCTCATGGGCTCAAAGAGTTAAAATTGTTGTTGGTGCAGCTAGAGGACTTGAATATCTTCATGAAAAGGCAGAGACTCATATTATCCTTCGTTACATTAAGTCTAGTAACATAATGCTTTTCGATGATGATGTTGCAAAGATTGCTGATTTTGATTTGCCAAATCAAGCCCCTGATGCAGCAGCACGCACGACTTCATTCTACCCGTGTTCTTGGAACCTTTGGTTATTATGCTCCAGAGTAACTTGCTACGGAAGAACGATGAGAAGAAGACAAGAAGAAAGGAGAGAAGAAGAAACCGTCAGAAGCGAGAATGAGGGGAATGCAATTAGGGTTCAACAAATTCCCCTTTAA 423 0.3995 MFNFIIIVDIGCKGVKGAQPGLVLSWAQRVKIVVGAARGLEYLHEKAETHIILRYIKSSNIMLFDDDVAKIADFDLPNQAPDAAARTTSFYPCSWNLWLLCSRVTCYGRTMRRRQEERREEETVRSENEGNAIRVQQIPL. 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01841 140 Gene3D Transferase(Phosphotransferase) domain 1 16 120 - -
Seca8g01841 140 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 9 89 - -
Seca8g01841 140 ProSiteProfiles Protein kinase domain profile. 1 140 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g01841 140 Pfam Protein tyrosine and serine/threonine kinase 24 95 IPR001245 GO:0004672|GO:0006468
Seca8g01841 140 SUPERFAMILY Protein kinase-like (PK-like) 22 85 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01841 Seca-Chr8 38074662 38075084 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01841 24 82 Receptor kinase-like Gene Family AT2G39360 55.932 9.15e-15 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Seca8g01841 PK_Tyr_Ser-Thr 1.1e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01841 K13436 - gmx:547595 136.732