Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01837 ATGATAAATGATTTTAATGATATTAAGAAGATTGATATGAAAAATATCAGTGAAGATGATGTTTGTAAATATGAATTTGACGATCTAGATGTGGCCCACGAATTCTTCAGTTGGTATGGTAGGTTGAATGGGTTCTCTGTTCGTAAGAGCAATGTGGTACCAAACAGTAACGGTGACATTTTGCAGCAAACACTTGTTTGTTTTGCACAAGGATTTAGAAGGGCTAGCCGCTCCACAAGAAGTTCTAAAAAGAGAGAATCGAAACCGAAAACGATGTTTGATTGTAAAGCAGTGTTCCATGTTCACATCAATATTAACTCAGACCGATGGTATGCGACAATATTTGATGATAAACACAATCACAAATTGTTGGGAGAACAATATTGTGGCATGTTACCAGCATAA 405 0.3605 MINDFNDIKKIDMKNISEDDVCKYEFDDLDVAHEFFSWYGRLNGFSVRKSNVVPNSNGDILQQTLVCFAQGFRRASRSTRSSKKRESKPKTMFDCKAVFHVHININSDRWYATIFDDKHNHKLLGEQYCGMLPA. 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01837 134 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 15 127 - -
Seca8g01837 134 Pfam FAR1 DNA-binding domain 34 124 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01837 Seca-Chr8 38045219 38045623 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca8g01837 FAR1 2.7e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01837 - - tpra:123914620 135.191