Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01828 ATGGCTATGAAGTATGCAAAAGCTTTTGGTTCTAAGCACCCAAAGCTTTGGCAGCCTTCACAGCTATATGGCCTAACCCATCTCAGATGTTATAGACTTGACAAGCCTAATATGCATGTGGGTGTGGTTGGTGTCGGTGGGTTAGGCTATATGGCTATGAAGTTTGCCATAGCTTTTGGTGCTAAGATTATTGTTACCTTAGCACCAAAAGCTTCAGCTACCTTCATAGCCATATGGCCTAACCCATCGAGAGTGAACTTTTCAGGTTACATATTTATGAGTTTTTGCACACTTTTGGTTGGATTTCTTGATGGCTTACCTCTTGAAGTTGTTGCACCTCATCTCAATGATGGAATCACAATGTGTAACTCTATCAGATATTGTGGACTTGACAAGCCTAATATGCATGTGGGTGTGGTTGGTGTCGGTGGGTTAGGTTATATGGCTATGAAGTTTGCCAAACCTTTTGGTGCTATGCTAACAATAAACAGTACATCACCCAATAAAAAAGAGGATGTGCTAGAACACCTTGGAGCTGACTCATTTAAGATAAGTCGTGATCAAGATCATATGCAGGTATAA 582 0.4107 MAMKYAKAFGSKHPKLWQPSQLYGLTHLRCYRLDKPNMHVGVVGVGGLGYMAMKFAIAFGAKIIVTLAPKASATFIAIWPNPSRVNFSGYIFMSFCTLLVGFLDGLPLEVVAPHLNDGITMCNSIRYCGLDKPNMHVGVVGVGGLGYMAMKFAKPFGAMLTINSTSPNKKEDVLEHLGADSFKISRDQDHMQV. 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01828 193 Gene3D - 28 66 - -
Seca8g01828 193 Gene3D - 117 192 - -
Seca8g01828 193 Gene3D - 99 116 - -
Seca8g01828 193 FunFam Cinnamyl alcohol dehydrogenase 117 193 - -
Seca8g01828 193 PANTHER ALDEHYDE REDUCTASE 27 66 IPR047109 GO:0016616
Seca8g01828 193 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 26 65 IPR036291 -
Seca8g01828 193 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 106 191 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01828 Seca-Chr8 37620801 37623690 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01828 104 192 Monolignol Biosynthesis Gene Families AT4G37980 50.562 6.39e-17 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01828 K23232 - tpra:123922700 117.857