Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01823 ATGCAGAACGCAACGAGAGCTGAAGCAGAACGATTGCTGGGGATCTCAGAGAAGCTGTTGCAGAACCGCGATCTGATGGGTTCAAGGGAATTCGCGATCCTTGCTCAAGAAACTGAGCCCCTTCTAGAAGGTTCCGACCAGATCCTCGCCATCGTTGACGTCCTCCTCGCCTCCGAGAAGCGCGTGAACAACCACCCTGACTGGTACGCTATTCTCCAAATCGATCGCCTTTCCGACGACCTCGACCTCATCAAAAGGCAGTACCGCCGTCTCGCCCTCCTTCTCCACCCTGACAAGTCCCGCTTTCACTTCGCCGACCACGCTTTCAAGCTCGTCGCCGATGCTTGGGCCATCCTCTCTGACCCAATCAAAAAATCCCATTACGACAAAGACCTCTCTTTCTTTTCCCGTGTCGATTTATCCGTCCCTGGTTGGGTCCAGCAGGATAAGTTACCCGTTCGCAGGACTGGGCCCGGGCCTGGACCCAGCCCAAGCGCTCGCAACAACGCGTCTGCTGCAAGGGACGAGATTGCTGCAGATGAGAACTCGCGGCGGAAGAATTCGACTTTCTGGACGGCGTGTCCGTACTGTTACCGTATGTACGAGTATCCTAGGGTTTATGAGGGTTGCTGCTTGAGGTGCCAGAATTGCGAGAGATCCTTCCATGGCGTTGCGGTTCAGTCTATGCCGCCGCTGGTGCCAGGGCAGGATGCTTATTATTGTTGCTGGGGTTTCTTTCCGATGGGATTCGTCATTGGAAACAATAGTTCGCCGGAGAAAGAGGCTGCTGCTCCGGAGGCTCCGGCGGCTCCGCCGCAGTCATCGCCGCAGCCACAGCCACAGCCACAGCCTGCTTCTTCGCTTCCGAATTGGATGCCAGCGCCGGCGGTGAACGGCGGGAATAATGCAACGCCGACTCCGGCGTCGATGCCGGGGAGAGTGACTAGGTCAACTGCAGCTGCGGGTGTTCCGAATGGGGTTGCTTCGGGTTCGGGATCTGGTCAGAAGAAGCGAGGGAGGCCGCGAAAGTTTCCTCTGTCCTAG 1044 0.5728 MQNATRAEAERLLGISEKLLQNRDLMGSREFAILAQETEPLLEGSDQILAIVDVLLASEKRVNNHPDWYAILQIDRLSDDLDLIKRQYRRLALLLHPDKSRFHFADHAFKLVADAWAILSDPIKKSHYDKDLSFFSRVDLSVPGWVQQDKLPVRRTGPGPGPSPSARNNASAARDEIAADENSRRKNSTFWTACPYCYRMYEYPRVYEGCCLRCQNCERSFHGVAVQSMPPLVPGQDAYYCCWGFFPMGFVIGNNSSPEKEAAAPEAPAAPPQSSPQPQPQPQPASSLPNWMPAPAVNGGNNATPTPASMPGRVTRSTAAAGVPNGVASGSGSGQKKRGRPRKFPLS. 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01823 347 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 291 - -
Seca8g01823 347 MobiDBLite consensus disorder prediction 150 181 - -
Seca8g01823 347 MobiDBLite consensus disorder prediction 257 347 - -
Seca8g01823 347 ProSitePatterns Nt-dnaJ domain signature. 109 128 IPR018253 -
Seca8g01823 347 Pfam DnaJ domain 67 129 IPR001623 -
Seca8g01823 347 SUPERFAMILY Chaperone J-domain 61 132 IPR036869 -
Seca8g01823 347 PRINTS DnaJ domain signature 69 87 IPR001623 -
Seca8g01823 347 PRINTS DnaJ domain signature 104 124 IPR001623 -
Seca8g01823 347 PRINTS DnaJ domain signature 88 103 IPR001623 -
Seca8g01823 347 MobiDBLite consensus disorder prediction 297 313 - -
Seca8g01823 347 Gene3D DnaJ domain 55 139 IPR036869 -
Seca8g01823 347 ProSiteProfiles dnaJ domain profile. 67 132 IPR001623 -
Seca8g01823 347 CDD DnaJ 67 121 IPR001623 -
Seca8g01823 347 SMART dnaj_3 66 124 IPR001623 -
Seca8g01823 347 MobiDBLite consensus disorder prediction 269 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01823 Seca-Chr8 37544291 37545361 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01823 2 346 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 48.468 5.42e-106 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01823 - - gmx:100816918 506.908