Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01814 ATGGGCACCTATGGATATTGTGCACTAGAGTATGCAATGACAGGTCAACTGACTCTGAAATCAGATGTTTATAGCTTTGGTGTAGTTCTTCTGGAAATAATTACTGGAAGGAAAGCGATTGGCAATTCAAAATATGAAGGAGAGCAGAATCTTGTTGCGTGGGCAAATGGGAAGGGCTTCTCTAAGTTTTTTGGCCTTCGCAATTCATCATCAGGTTACATTCCTTTTTCTTCTAGAAAATCTTCTGAGCACTTCCATTCAGTCATTGCCTTTCAAACCTCAGCAGTTGGAAGCAACGAGGGATACAGGAAAGATGTGGTAGAAGCAAAACTGAAAGTGGCCATAAATGGGTTTGGTCTGACGATTGGCAATGGTTCCATGGTTATTTTGGTCTGA 396 0.4141 MGTYGYCALEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIGNSKYEGEQNLVAWANGKGFSKFFGLRNSSSGYIPFSSRKSSEHFHSVIAFQTSAVGSNEGYRKDVVEAKLKVAINGFGLTIGNGSMVILV. 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01814 131 SUPERFAMILY Protein kinase-like (PK-like) 1 55 IPR011009 -
Seca8g01814 131 Gene3D Transferase(Phosphotransferase) domain 1 1 112 - -
Seca8g01814 131 PANTHER OS07G0668900 PROTEIN 1 56 - -
Seca8g01814 131 Pfam Protein tyrosine and serine/threonine kinase 6 40 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01814 Seca-Chr8 37174393 37176085 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01814 1 55 Glycoside Hydrolase AT3G07070 72.727 3.62e-22 88.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Seca8g01814 PK_Tyr_Ser-Thr 6.8e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01814 - - gmx:100776041 103.219