Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01810 ATGAGCGAAGAAGAGAAGAAGATGTGTCTTCTTACCGCAACGAACACAGATTTCAATGCAGGTTTTCTTCTTGACCCTGCAAAATGTGCTGCGCTGAATTTGCAAGACAAACAAAGACTAGTCCATGAGATTGCTCAGTCAAAAGATGCCCCAAATATGCTTCATTCATTTACTCGCAGGGAACTTCTAGAAATAATCTGTGCTGAATTAGGCAAAGAGAGGAAGTACACAGGATATACTAAGAGTCAAATGATAGAACATCTTCTGAAGATAATTTCTAAAAAATCCAATTCAGATGTCATCCAAAATACTTGTGCCCATTCTCCTGCCAAAAGTTGCATTGGATCTAAAAGGAAAAAAGGACCTCCATCTCTGGATTTACAATATGCTCCTCTAGAGAACAGTAAAGAGGAAACGGTGAAAATCTTGGTCTGTCAGAATGTTGCATGCAAAGCTACATTGAATCCTGAAGATTCTTTCTGCAAAAGATGTTCATGTTGTATATGTCATTGTTATGATGATAACAAGGATCCAAGTTTGTGGTTGACCTGCAGTTCTGATCATACCAATGAGGAGTCATGTGGAATGTCGTGCCATTTGCAATGTGCTTTGAGTAATCAAGTACTTGGCATTTTGAAGGGCCGTGGTGGTATAACCTTGGATGGAAGCTTCTATTGTGTTTCATGTGGAAAAATTAATGAATTAATGAGGACATGGCGAAAGCAATTATTGGTTGCCAAAGAAGCAAGAAGAGTGGATATACTATCATTACGAATATCCTTGGCCCACAGAATTCTTGTAGGAACAGAAGTCTACAAGGAAGTGCAGAAGATTGTTGAAACTGCTCTCAAATTACTGGAGAATGAAGTGGGACCTCTGGATCATGTATATGCTCGGATGACACGTGGAATTGTGAGCAGGCTCTCAAGTGGTGCTGAGGTTCAGAAGTTGTGCAATACTGCAGTTGAATGTTTTGATTCAAAGTTTTCTGACCTCTTCTCTAATTGTGCAGAAAAGAAAGATGCGCCAACATGCTCTATACGTTTTGAAGAGTATCTTCCTACCTCAGTGATCATTGTGCTAGAATACAATGATAAACTTTTAAAGAACTTTCTAGGCTGCAGGCTTTGGTACCGAATGTCAACAATGGACTACCCAGAACAACCCGCCTTCATTGTTTTAAGGCCTGAGAAAAGATTCAAGTTAGAAAACCTCCATCCTTCAACTGAATACTTTTGCAAGGCTTCTCTATTCAGCAGCACAGGGATTTTGGGTGCAGCTGAAGCTAAATGGGTGACACCTTGTGAACCCTTAAGTTCTCCTCCAAAAATCATTAGACATGGTGGGAATCATTCAAGAGGTACAGTCATGGTGGACATAAGTGCTCAAGACCAAATTAAGATAACTGCTGAAAATCATCAGGTAGAATCTGCCAACTCTGACATAAAGTTATCACCTGGAGACCATCCTGCAAAACACATGTTTTTGAACAACAGGGGCAGGTTTGAAGAGTTTCTCACAAAGCCTCCATCAGTTGAACCTTTTTCATATAAAAATTTTGCAGCAGTTTCACCATCCACACCTTCTAAATCCAGTGAAATGAGGCAAATTGTTGGTTTGAGTTCTAGAAAGCGCTTGAAGGAAAATGATTATGAGTATTCTGTCAGGGTAGTCAAATGGTTAGAGAATCAAGGGCACATAGAAGAAATTTTCAGAGTGAAATTTCTCACTTGGTTCAGCCTCAAGGCTACTCAGCAGGAGAGAAGGGTGGTTAGTGCTTTTGTTGATGCACTGATTGATGACCCAGCAAGCTTAGCGGATCAGCTCATACACACTTTCACAGACGAAATATATTGCGAGCAGAAATCTTAG 1872 0.4017 MSEEEKKMCLLTATNTDFNAGFLLDPAKCAALNLQDKQRLVHEIAQSKDAPNMLHSFTRRELLEIICAELGKERKYTGYTKSQMIEHLLKIISKKSNSDVIQNTCAHSPAKSCIGSKRKKGPPSLDLQYAPLENSKEETVKILVCQNVACKATLNPEDSFCKRCSCCICHCYDDNKDPSLWLTCSSDHTNEESCGMSCHLQCALSNQVLGILKGRGGITLDGSFYCVSCGKINELMRTWRKQLLVAKEARRVDILSLRISLAHRILVGTEVYKEVQKIVETALKLLENEVGPLDHVYARMTRGIVSRLSSGAEVQKLCNTAVECFDSKFSDLFSNCAEKKDAPTCSIRFEEYLPTSVIIVLEYNDKLLKNFLGCRLWYRMSTMDYPEQPAFIVLRPEKRFKLENLHPSTEYFCKASLFSSTGILGAAEAKWVTPCEPLSSPPKIIRHGGNHSRGTVMVDISAQDQIKITAENHQVESANSDIKLSPGDHPAKHMFLNNRGRFEEFLTKPPSVEPFSYKNFAAVSPSTPSKSSEMRQIVGLSSRKRLKENDYEYSVRVVKWLENQGHIEEIFRVKFLTWFSLKATQQERRVVSAFVDALIDDPASLADQLIHTFTDEIYCEQKS. 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01810 623 CDD PHD_VIN3_plant 165 229 - -
Seca8g01810 623 PANTHER VIN3-LIKE PROTEIN 2-RELATED 22 474 IPR044514 GO:0010048|GO:0040029
Seca8g01810 623 Pfam PHD - plant homeodomain finger protein 145 264 IPR032881 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01810 Seca-Chr8 36747452 36752782 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01810 546 623 PHD Gene Family AT5G57380 41.026 1.54e-14 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01810 - - gmx:100785502 991.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g01810 8 36747452 36752782 Seca8g01810 8 36747452 36752782 ECH