Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01807 ATGCCTCACAGAGCCACTTACTTTTTCCCGAGGCAGTTTCCGGAAAGAAGGTTGGATGAATCTTCAAAACAGATATTAGATCACGAGAAGCAGAAACTCGTCAACTCAATAAAATCACCAGATACCTTCGGCGCTGAAAGCGACCCGCCGAAAAGCTCTTTCCTAACGAGTAGAACTCCTGCTCCTAATACCAAGGATGACGACGACGTCGTTTTCTCCCCGGCCAAAAACTCGGCGGTTTCGGACCTCTTCACCGGCGGAGACAAGTACCGAACCAAGCTCAAGCCAATTGAAGCGTTCTGCGATTGGTTGATCGACAAAGGGAATCGGAATCGACCTAGTCAGCAGCTCAAGTTCCATCGCAACCACGAAGACGAGGAGGACCACGAGCTTCTTCTTCCTCCTGCGCCGCCGGTCAAAGATTCCGTTGACCGGCAGGTTTCTCTGCCGAGGCTATCCAGCGGGAGCAGTTACGCCGGGAGCTTGTTCACGTTGGATGGCACCGCCACTTTCTCAAGCGACACTACCAAAGACGACGCGTCATTTCGAGTCTCCACCGTGGACGCAACAAGAAAACATGAACAAGAAGAAGCGGAGGTAGAAGAAGAAGAAAAACGTAATGAAGAAGGTTACGCGCGGAAGTCCAAAGAAAGCTACCACCTACAACTCTCGCTTGCGAAGAGGCTCACTTTCTTAGCAAGCCTTGCCTCCGAACCTGTTCTCGCTTTTGACACTGGAATTGAAACCTGGGATGCCGAATCCGTTTCACGTCGTCTATGGGTGACGGGGTGCTTGTCGTACACGGAAAAGATATCTGACGGTTTTTACAACATATTGGGGATGAACCCTTATTTGTGGGTGATGTGTAATGACGTGGAAGAAGAAGGAAAGTGCCTCCCGACTCTGATGGCGCTTAAGGCGGTTGAGCCTAGTGAGTCGTCACTGGAGGTGGTTCTTATCGATAGACGTGAAGACTCTCGGCTTAAGGAACTTCAGGATAAAGCTCAAGAGTTGTACTCTGCTTCGGAGAATGCCTTGGTGCTGGTGGAAAAGCTGGGAAAACTTGTTGCTATATGTATGGGGGGTACGTTCCCGGTGGAGCAAGGAGATCTGCACAAGCGATGGAAGGTGGTTAGTAAGAGGTTGAGGAACTTTCATCAGTGTGTGGTGCTTCCTATAGGTAGTTTATCCACGGGACTCTGTAGGCATCGCGCGATTCTCTTCAAGAGGTTGGCAGATTACATAGGTTTGCCATGCCGCATCGCTCGAGGTTGTATGTACTGTGCTTCAGATCATAGATCGTCTTGCCTTGTCAAGATTAAAGATGACAGGCAGTTCTCAAGGGAATATGTTGTTGACCTGGTTGGGGAACCGGGAAATATTCATGGGCCAGATTCCTCAATTAATGGAGCATATGTGTCTTCGGTTCCTTCCCCATTTCAAATTTCTCATTTGAGAGAATCCCAGTCGCCATATGTGGATGGCGCAGCTTGTTCTCAGTCTACAAGTCTGAATCACAGTTCTGTTATTCCTGAAAGTCACCTGTATTCAGGTCGTATAGAGGAAGATCAACAAGCTAAAGAAACTGATTTACTCAAAAATAATAATGGCTCCATTTATGCTTCAGTCGATCAAACTTTAAGAGGTGTTTCTGAAGCTCTTCATCCAGCTTCCGAAGCATCATTACATGCATATCCCAGGCTCGGTAAAGATTCAGTTGTAGAACAGGAAACCTCCAACAATGAGATCATTGTAAAGGACAGTTCTGGGGGCAAAAGTAATTTTAAGCAATCTGTACTTACCTCATCCAATGAGTCAGAACAGGAACAGGTTGACAAGAGACTTGAAAACCAGGGTGCTGGGAATATTCCAAGATACTTAAATCTTGAACCATCACTTGCAATGGACTGGCTAGAGATATCATGGGATGATTTACGGATCAAAGAGCGTGTTGGTGCCGGATCATTTGGGACCGTGTACCGTGCTGAGTGGCATGGATCAGATGTTGCTGTCAAGGTCTTATCAGTTCAGAATTTCCATGATGATCAGTTGAAAGAGTTTCTAAGAGAGTTGCGGTAG 2079 0.4723 MPHRATYFFPRQFPERRLDESSKQILDHEKQKLVNSIKSPDTFGAESDPPKSSFLTSRTPAPNTKDDDDVVFSPAKNSAVSDLFTGGDKYRTKLKPIEAFCDWLIDKGNRNRPSQQLKFHRNHEDEEDHELLLPPAPPVKDSVDRQVSLPRLSSGSSYAGSLFTLDGTATFSSDTTKDDASFRVSTVDATRKHEQEEAEVEEEEKRNEEGYARKSKESYHLQLSLAKRLTFLASLASEPVLAFDTGIETWDAESVSRRLWVTGCLSYTEKISDGFYNILGMNPYLWVMCNDVEEEGKCLPTLMALKAVEPSESSLEVVLIDRREDSRLKELQDKAQELYSASENALVLVEKLGKLVAICMGGTFPVEQGDLHKRWKVVSKRLRNFHQCVVLPIGSLSTGLCRHRAILFKRLADYIGLPCRIARGCMYCASDHRSSCLVKIKDDRQFSREYVVDLVGEPGNIHGPDSSINGAYVSSVPSPFQISHLRESQSPYVDGAACSQSTSLNHSSVIPESHLYSGRIEEDQQAKETDLLKNNNGSIYASVDQTLRGVSEALHPASEASLHAYPRLGKDSVVEQETSNNEIIVKDSSGGKSNFKQSVLTSSNESEQEQVDKRLENQGAGNIPRYLNLEPSLAMDWLEISWDDLRIKERVGAGSFGTVYRAEWHGSDVAVKVLSVQNFHDDQLKEFLRELR. 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01807 692 ProSiteProfiles Protein kinase domain profile. 645 692 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g01807 692 Coils Coil 186 213 - -
Seca8g01807 692 ProSitePatterns Protein kinases ATP-binding region signature. 651 672 IPR017441 GO:0005524
Seca8g01807 692 MobiDBLite consensus disorder prediction 188 211 - -
Seca8g01807 692 MobiDBLite consensus disorder prediction 582 608 - -
Seca8g01807 692 PANTHER ARMADILLO REPEAT-CONTAINING PROTEIN 3 256 461 - -
Seca8g01807 692 Gene3D Phosphorylase Kinase; domain 1 638 692 - -
Seca8g01807 692 MobiDBLite consensus disorder prediction 33 72 - -
Seca8g01807 692 MobiDBLite consensus disorder prediction 582 606 - -
Seca8g01807 692 Pfam Ethylene-responsive protein kinase Le-CTR1 252 461 - -
Seca8g01807 692 SUPERFAMILY Protein kinase-like (PK-like) 626 691 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01807 Seca-Chr8 36501833 36511442 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01807 1 691 MAP Kinase Kinase Kinase AT4G24480 47.446 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01807 - - gmx:100786546 988.793