Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01777 ATGGTGTTGAGGAAAGTAGGCAAGTATGAGATTGGGAGAACCATTGGAGAGGGAACCTTCGCGAAGGTCAAATTCGCTCAGAACACAGAAACTGGCGAGAGCGTCGCCATGAAGGTGCTCGATCGCAGCACCATCATCAAGCACAAAATGATCGACCAGATCAAGAGGGAGATTTCTATTATGAAGCTAGTCAGACATCCACATGTTGTTCGTCTGTATGAGGTTCTAGCAAGCCGTACTAAGATTTACATCGTACTGGAGTACATTACAGGCGGTGAATTGTTTGATAAAATTGTACACCACGGGCGTCTCAGTGAAGCTGAATCTAGAAGATACTTCCAACAGCTTATTGATGGTGTAGATTATTGCCACAGTAAGGGAGTTTATCACAGAGATTTAAAGCCTGAAAACCTTTTACTTGATTCACAAGGAAATATAAAGATTTCAGATTTTGGTTTGAGTGCATTGCCAGAACAGGGGGTTAGTATGCTTCGGACAACTTGTGGGACTCCTAATTATGTAGCCCCTGAGGTACTCAGTCACAAAGGTTATAATGGTGCTCTGGCAGATGTTTGGTCCTGTGGGGTTATCCTCTATGTACTAATGGCTGGATATCTCCCCTTTGATGAGCTTGATCTAACTACGTTATACAGTAAGATTGAGAAAGCAGAGTTTTCATGCCCTCCTTGGTTTCCTGTGGGAGCAAAATCTTTGATACACAGAATTTTGGACCCAAATCCTGAACGTGGAGAAAGACGGGTAGCTGAAAAGATGGTAGAGTTTTAA 786 0.43 MVLRKVGKYEIGRTIGEGTFAKVKFAQNTETGESVAMKVLDRSTIIKHKMIDQIKREISIMKLVRHPHVVRLYEVLASRTKIYIVLEYITGGELFDKIVHHGRLSEAESRRYFQQLIDGVDYCHSKGVYHRDLKPENLLLDSQGNIKISDFGLSALPEQGVSMLRTTCGTPNYVAPEVLSHKGYNGALADVWSCGVILYVLMAGYLPFDELDLTTLYSKIEKAEFSCPPWFPVGAKSLIHRILDPNPERGERRVAEKMVEF. 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01777 261 FunFam Non-specific serine/threonine protein kinase 2 259 - -
Seca8g01777 261 Pfam Protein kinase domain 9 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g01777 261 ProSitePatterns Protein kinases ATP-binding region signature. 15 47 IPR017441 GO:0005524
Seca8g01777 261 SUPERFAMILY Protein kinase-like (PK-like) 6 249 IPR011009 -
Seca8g01777 261 SMART serkin_6 9 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g01777 261 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Seca8g01777 261 PIRSF ILK 4 252 - -
Seca8g01777 261 FunFam Non-specific serine/threonine protein kinase 1 88 - -
Seca8g01777 261 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 7 248 - -
Seca8g01777 261 ProSiteProfiles Protein kinase domain profile. 9 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g01777 261 Gene3D Transferase(Phosphotransferase) domain 1 3 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01777 Seca-Chr8 35694040 35698913 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01777 1 248 CBL-interacting serine-threonine protein kinases AT4G24400 88.710 3.54e-169 472
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Seca8g01777 Pkinase 6.1e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01777 - - zju:107421347 482.256