Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01774 ATGGCCATGGACAACTACTCCTACCCTAATTCCCGCGATTCCTCGCCTCGTTCTCGCGATGTATTGGACAACGAAAACCCCTCCACCTTCGAAGAACCCCCTCCTTCCTGCAAAGTCAAGCTAATGTGCAGCTACGGCGGTAAAATCCAACCCAGGCCTCACGATAACAACCTCTCATACATCGGCGGCGACACCAAGATCCTCGCCGTCGATCGTAACATCAAATTCTCCGCCGTCATGGCCAAGCTCTCTTCCCTCACCAACTCCATCGATTTCTGCTTCAAGTACCAACTCCCCGGCGAAGACCTCGATTCCTTGATCTCCGTCACCAACGAGGAAGATCTCGACCACATGATGGTTGAGTATGATCGCCTGTGTCGCACCTCACCTAGACCTGCAAGGTTGAGGCTCTTTCTCTTTCCACTCAACAACACTCCCAGCATCAATCTCGTTCCCACGGAGTCGAAGCCGGAGAAGCAGTGGTTCGTGGACGCTCTCAATTCCGTTCAGGTTCCGTCTCTAGAAGCTCCTTCTCCTTCTCCGCCGCCGCTGCCGGCAGTAAATCCAGATTTTCTGTTTGGATTGGATAATGCATATCCCGCGGTTCCCGCGGCGAAACAGTCGGACTTCCCGGAAATTCCGGCGAAAGATGCGGTGGCGGGATCGGAGTGCGAGTCCGAAGATCGGCAAACGGTTAGAGAATCCGAAATTCAGGAGATACAGTTACAGAGATTGCAGCTTGGGAACAATGAGCAACGAAAAAACGAAGAAGAGAATGGCAGGGTTTACGGTGTGGACTATTACCATCAGAAAAATTCGGAGAAAGTGGCGCCGTTTACAACACATGCACCTGCTTCGCAAGTCCATTCCGGTCCGGTTCCGGTTCATGCTCCTGGACCGGTTTCGGTTCAAGCGTCGTTTTTGCCAGAGCGGCATATCCCTGGCGGTGGTTATCCGTTAACGGTTTCTGCAAATGGAAACGAACCGGGTCCGGTTTATCTCATTCAAACACCTTCTGGAATGTACCAAGCCGTCCGGCCTGTAACCGGACCGATGGGTCAACCGGTTTACTTCCTTCAACCACCGGGTTCGGTTTCGCTTTCGCACTCACAAGCAACGCACAAGATTGCTTACAATGTTACTTCAGAGGGTGGTGTTGTTTCCGAGCGTGGCTATTCGCAGGTTGCGTATTTGCCTGACAGGTCAGCTTTGCGGCGACAGGCCGCGGCGGCGCCTGGCGGTGACGGGTGGCAAGGGTGTTGA 1263 0.5352 MAMDNYSYPNSRDSSPRSRDVLDNENPSTFEEPPPSCKVKLMCSYGGKIQPRPHDNNLSYIGGDTKILAVDRNIKFSAVMAKLSSLTNSIDFCFKYQLPGEDLDSLISVTNEEDLDHMMVEYDRLCRTSPRPARLRLFLFPLNNTPSINLVPTESKPEKQWFVDALNSVQVPSLEAPSPSPPPLPAVNPDFLFGLDNAYPAVPAAKQSDFPEIPAKDAVAGSECESEDRQTVRESEIQEIQLQRLQLGNNEQRKNEEENGRVYGVDYYHQKNSEKVAPFTTHAPASQVHSGPVPVHAPGPVSVQASFLPERHIPGGGYPLTVSANGNEPGPVYLIQTPSGMYQAVRPVTGPMGQPVYFLQPPGSVSLSHSQATHKIAYNVTSEGGVVSERGYSQVAYLPDRSALRRQAAAAPGGDGWQGC. 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01774 420 CDD PB1_UP2 42 140 - -
Seca8g01774 420 Pfam PB1 domain 54 141 IPR000270 GO:0005515
Seca8g01774 420 SMART PB1_new 53 142 IPR000270 GO:0005515
Seca8g01774 420 Gene3D - 59 141 - -
Seca8g01774 420 PANTHER OS05G0427100 PROTEIN-RELATED 8 322 - -
Seca8g01774 420 MobiDBLite consensus disorder prediction 1 34 - -
Seca8g01774 420 SUPERFAMILY CAD & PB1 domains 54 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01774 Seca-Chr8 35641566 35642828 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01774 38 169 MAP Kinase Kinase Kinase AT5G57610 41.606 3.11e-25 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01774 - - pcin:129294124 386.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g01774 8 35641566 35642828 Seca8g01774 8 35641566 35642828 ECH