Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01772 ATGGCTAGAGAGATCAAAACTGGTGAAATTTTTGCTCTGAAGAAAATACGAATGGACAATGAGAGAGAAGGGTTTCCTATAACTGCTATACGTGAAATCAAAATTCTAAAGAAACTACACCATGAAAATGTAATCAAGTTGAATGAATTTGTGACTTCTCCAGGCCATGAGAAAGATGAACAAGGGAGGCCAGGCTAA 198 0.3737 MAREIKTGEIFALKKIRMDNEREGFPITAIREIKILKKLHHENVIKLNEFVTSPGHEKDEQGRPG. 66
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01772 65 ProSiteProfiles Protein kinase domain profile. 1 65 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g01772 65 SUPERFAMILY Protein kinase-like (PK-like) 2 55 IPR011009 -
Seca8g01772 65 Gene3D Phosphorylase Kinase; domain 1 1 64 - -
Seca8g01772 65 Pfam Protein kinase domain 2 54 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g01772 65 PANTHER CELL DIVISION PROTEIN KINASE 2 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01772 Seca-Chr8 35507975 35508524 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01772 1 64 Core Cell Cycle Gene Families AT5G10270 84.375 3.54e-32 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Seca8g01772 Pkinase 4.5e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01772 K08819 - csin:114293090 122.479