Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01755 ATGCCGAATCCCGATGGTCAGGCTCAGCGTCATCACCAAAACCGGTCCAGGAATCGACCGTCCACGTCAGCAGCTCGACCGGTGGTTCGGCCGAGGGTTCCTTTGAGGCAGTTGCTGCGGGTGGCATCGGTGGCCAGCGGTATTCAGTTCGGTTGGGCCTTACAGCTTTCTCTCTTAACCCCTTATGTTCAGCAGCTTGGGATTCCTCACCAATGGGCCAGCATCATCTGGCTCTGCGGCCCAGTTTCGGGGCTCTTCGTTCAGCCCTTGGTAGGCCACTTGAGTGACCGCTGCACCAGCCGGTTCGGTCGACGAAGACCGTTCATCTTGGTCGGGGCTGCGTCCATCGTCGTCGCCGTTATAATCATCGGTTACGCCGCCGACATCGGATGGTTGCTCGGCGATAACGAAGCTTACCGGCCTTGGGCTATAACCGTTTTCGTCATCGGGTTTTGGATTCTCGATGTGGCTAATAACGTCACTCAAGGTCCTTGTAGAGCTTTGCTTGCTGATCTCACTAGCAAGGATCCTCGAAGGACGCGTGTTGCAAATGCTTATTTCTCCCTGTTTATGGCCATTGGTAACATTCTTGGCTATGCGACCGGATCATACAGTGGTTGGTACAAGGTTTTTACTTTCACACATACCCGTGCATGCACTATTAGTTGTGCAAATCTCAAGTCGGCTTTCTTTCTTGACGTTGCTTTCATTGTGGTCACAACATATGTCAGCATCATGGCAGCAAATGAAGTGCCTCTAAATTCAAACGAGGCAGCCCATGCTGGAGAAGGGGCAGGGGAGTCAGGTAGTGCGGAAGAAGCTTTCATGTGGGAATTATTTGGGACATTCAAATATTTTACAAACCCTATATGGATAATATTGTCTGTAACTGCTTTGACATGGATTGGGTGGTTCCCATTTATTCTGTTTGATACTGATTGGATGGGTCGAGAAATCTATGGCGGTGATCCAAATGGAGGCCTTACATATGATGCTGGAGTTAGAATGGGAGCACTTGGTTTAATGCTTAATTCAGTTGTTCTTGGAATAACATCATTGCTCATGGAGAGGCTATGCAGGAAGCGGGGGGCTGGTTTTGTTTGGGGAATCTCAAATATTTTAATGGCTGTTTGCTTTCTTGCAATATTAGTAGTAACCTATGTTGCAAATAACATTGGTTATGTAGGCAAAGATCTACCACCACCAACTGGCATTTTGATAGCTGCATTGATAATATTTACCATTCTCGGGTTTCCATTGGCAATCACTTACAGTGTTCCATATGCCTTAATTTCCTCACATATTGAACCATTGGGACTTGGCCAAGGGTTATCAATGGGTGTCCTGAATCTGGCTATAGTGATCCCACAGGTATTTTTTCTTCTGAATTCCTTTTATATAGTATTAAAGTTGAACTACCTTTATTTTGTTGTTTATATCAACTCAGCGGGAAGCATACTCTTATTAGATTTTCATTTGAACTTGGTCAGCTTCTATAATTTAAAATATGTTACTGAGTCTTGA 1524 0.458 MPNPDGQAQRHHQNRSRNRPSTSAARPVVRPRVPLRQLLRVASVASGIQFGWALQLSLLTPYVQQLGIPHQWASIIWLCGPVSGLFVQPLVGHLSDRCTSRFGRRRPFILVGAASIVVAVIIIGYAADIGWLLGDNEAYRPWAITVFVIGFWILDVANNVTQGPCRALLADLTSKDPRRTRVANAYFSLFMAIGNILGYATGSYSGWYKVFTFTHTRACTISCANLKSAFFLDVAFIVVTTYVSIMAANEVPLNSNEAAHAGEGAGESGSAEEAFMWELFGTFKYFTNPIWIILSVTALTWIGWFPFILFDTDWMGREIYGGDPNGGLTYDAGVRMGALGLMLNSVVLGITSLLMERLCRKRGAGFVWGISNILMAVCFLAILVVTYVANNIGYVGKDLPPPTGILIAALIIFTILGFPLAITYSVPYALISSHIEPLGLGQGLSMGVLNLAIVIPQVFFLLNSFYIVLKLNYLYFVVYINSAGSILLLDFHLNLVSFYNLKYVTES. 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01755 507 NCBIfam sucrose/proton symporter 33 464 IPR005989 GO:0005886|GO:0008515|GO:0015770
Seca8g01755 507 Gene3D MFS general substrate transporter like domains 35 489 IPR036259 -
Seca8g01755 507 MobiDBLite consensus disorder prediction 1 27 - -
Seca8g01755 507 CDD MFS_SLC45_SUC 38 458 - -
Seca8g01755 507 PANTHER SUGAR TRANSPORTER 32 468 - -
Seca8g01755 507 FunFam Sucrose transporter SUC2 36 255 - -
Seca8g01755 507 Pfam MFS/sugar transport protein 53 286 - -
Seca8g01755 507 SUPERFAMILY MFS general substrate transporter 36 462 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01755 Seca-Chr8 34904679 34912612 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01755 7 464 Sucrose Transporter Gene Family AT1G09960 70.108 0.0 638
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01755 K15378 - gmx:100820483 766.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g01755 8 34904679 34912612 Seca8g01755 8 34904679 34912612 ECH