Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01743 ATGGCAAACCAGACAAAACAGAATTTTCCACCAGAAACCATGGAAGAGAATCAAGAGATCTTGAATTCAATTAAGCAGAGTTGTGAATTAGCAAGAAACTTTGAAACAAAACTACCCAACATGGTTAACCAACCTGAAATGCTACTCTTGTCCATTGATGAGGTAGTGAAAGCATTTGGTGGTGCCAAAGAAAGGCTAGTGATGATGATGTTGTCACAACAACAACAGGACATGACAATAACACCTTCTTCATTTGCTTCAATGCTGCCTCATGATCATGCTTTCAAGCAGGAAGCACAAACATTGGATCAGCAATTGGTTCTAATGCAGCAGCAATTTGATGTGAGGACCTTGTTTGGAAACAAGATGATGAGTACTGGTGGGGATGTTCATCAGCAGTTAAGGAATAGGGGTACCCTGATGAGGATTGGTGAAATGGGTGGTAGAGATGTTGAAGGTTCATCAAAAGGGTCTGAAGGAGAAATTCAAGGAATAGAAGCATCACCCTCAAGACCCAAAAAAAGCAGGAAGAATAATCTGGAGAAGAAGATAATGATATGTCCCGCACCACAAGTTGGAAACACAGAGATCCCACCGGAGGATGGTTTCACTTGGAGAAAATATGGCCAGAAAGAGATACTTGGTTCCAAATACCCAAGGAGTTACTATAGGTGTACCCACCAGAAATTATATGCTTGTCCAGCAAAGAAGCAAGTACAAAGAATTGATGAAAATCCTAACATGTTTGAAGTAACATATAGAGGTGAACATACATGTCACAAGTCCTCAACAGCACCATCATCATATCCACCACAACCACTAGTATTGGACATGAATCATATGATCTCAACAGACATAACTCAAACCATTTCACCCCAGTTGTCTCCGTCATCAGCTTCAGTCACCGCGTGGCTGTCATCGACGATAAATCTCAGCTTCCATGGTGGTGGTGGCCGCGGCGGCGGTGGACCCTCTACTACAAAATATGGTAGCACTGATTATCCTGTGGCTGATATGGCTGATGCTATGTTCAACTCGGGTAGTAGCAGTGGCAATAGTATGGAATGTCTTTTTCCTCTTGCTGAAGAAAATTGGGAACAAGGTGAGAAGAAAAATTGA 1119 0.4218 MANQTKQNFPPETMEENQEILNSIKQSCELARNFETKLPNMVNQPEMLLLSIDEVVKAFGGAKERLVMMMLSQQQQDMTITPSSFASMLPHDHAFKQEAQTLDQQLVLMQQQFDVRTLFGNKMMSTGGDVHQQLRNRGTLMRIGEMGGRDVEGSSKGSEGEIQGIEASPSRPKKSRKNNLEKKIMICPAPQVGNTEIPPEDGFTWRKYGQKEILGSKYPRSYYRCTHQKLYACPAKKQVQRIDENPNMFEVTYRGEHTCHKSSTAPSSYPPQPLVLDMNHMISTDITQTISPQLSPSSASVTAWLSSTINLSFHGGGGRGGGGPSTTKYGSTDYPVADMADAMFNSGSSSGNSMECLFPLAEENWEQGEKKN. 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01743 372 SUPERFAMILY WRKY DNA-binding domain 197 261 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca8g01743 372 MobiDBLite consensus disorder prediction 146 177 - -
Seca8g01743 372 Gene3D WRKY domain 189 262 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca8g01743 372 Pfam WRKY DNA -binding domain 200 259 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca8g01743 372 SMART WRKY_cls 199 261 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca8g01743 372 ProSiteProfiles WRKY domain profile. 200 257 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca8g01743 372 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 12 265 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01743 Seca-Chr8 34693503 34696394 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01743 18 359 WRKY Transcription Factor Family AT2G40740 34.783 1.62e-52 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Seca8g01743 WRKY 8.5e-28 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01743 - - mtr:11424132 361.303