Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca8g01742 | ATGGATATCCTCTGCCCTGAAAGTTTGAGCAAGAGAATAGTTGTGGCCAAGAAGCTAGCTCAGGGTCAAGAAGCTGCTACCCAGCTCAAGTTTCTGCTTCAGAATCCCTTTGAAGCTCATGGCTCTCTCTCATCAGAGGAACTTGTGACCAATGTGTTGAGATCTTTCACAGAGGCTCTTTCTATTGTAACCTCTTCCTCCTCTCAACCCTCTGCTGATGGTGCAGATGCAGATCAGAATAATCTGCTTAATTCCGGCGAAAATGGGTCGCCGGTGGTGGCCGGAGATTCCAATGAGAGTGGGAAGAAATATTCCTCTTTGGCCAAAAAGGGTAGGAGAGGTTGCTACAAAAGAAGGAAGAGTGCACAGACAAGGACCACAGTTTCCTACACTCACAGTGATAATCATGCATGGAGGAAGTATGGACAGAAGGAAATCCTGAATTCTGAATTCCCTAGGAGTTACTTCAGGTGCACTCACAAGTATGATCAAGGTTGCTCAGCAACAAAACAGGTGCAAAGGACACAAGAGAATCCAGATATGTACCAAACTACATACATTGGCATTCACACATGCAAACCCACCCCAAAGGCTACACAATTGATCAAAGATTATTCTACTACTTGGGATTCATTTCTGCTAAATTCTGATCCTGCTGATTCTAGTAGTGTTCCAAATGAACAGGAACATCATCATCACCATGTTATTAGCTCACCAAGCCTAACAATAAAACAAGAATATCCCAAAGAGGACACTCCTGCAGCAACTATGCCTTTAAACATGGAATCTGATAATGCAGATACTGTGTATTTTGGGGTGGAGTCTGTTCATTTTGGCAGTGACTTCCACTTTGATGAAAGTCAGTTGCTTCAATGCTTTGATAAGTGTCCTATGCTTAATTAA | 903 | 0.4297 | MDILCPESLSKRIVVAKKLAQGQEAATQLKFLLQNPFEAHGSLSSEELVTNVLRSFTEALSIVTSSSSQPSADGADADQNNLLNSGENGSPVVAGDSNESGKKYSSLAKKGRRGCYKRRKSAQTRTTVSYTHSDNHAWRKYGQKEILNSEFPRSYFRCTHKYDQGCSATKQVQRTQENPDMYQTTYIGIHTCKPTPKATQLIKDYSTTWDSFLLNSDPADSSSVPNEQEHHHHHVISSPSLTIKQEYPKEDTPAATMPLNMESDNADTVYFGVESVHFGSDFHFDESQLLQCFDKCPMLN. | 301 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca8g01742 | 300 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 19 | 224 | IPR044810 | GO:0003700 | |
Seca8g01742 | 300 | Gene3D | WRKY domain | 116 | 195 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Seca8g01742 | 300 | ProSiteProfiles | WRKY domain profile. | 127 | 190 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Seca8g01742 | 300 | MobiDBLite | consensus disorder prediction | 66 | 104 | - | - | |
Seca8g01742 | 300 | SUPERFAMILY | WRKY DNA-binding domain | 129 | 194 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Seca8g01742 | 300 | Pfam | WRKY DNA -binding domain | 134 | 193 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Seca8g01742 | 300 | SMART | WRKY_cls | 132 | 194 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Seca8g01742 | 300 | MobiDBLite | consensus disorder prediction | 219 | 245 | - | - | |
Seca8g01742 | 300 | MobiDBLite | consensus disorder prediction | 66 | 128 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca8g01742 | Seca-Chr8 | 34685878 | 34688750 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca8g01742 | 10 | 299 | WRKY Transcription Factor Family | AT3G56400 | 36.246 | 7.92e-47 | 157 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Seca8g01742 | WRKY | 9.8e-25 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca8g01742 | - | - | gmx:100796071 | 290.041 |