Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01734 ATGGAACTACATCCAAACGCGGCCTCCATGCTGAGAAGCAGGAACATACCTACTAGTTCTACTCCCCCACCATTGCTGGCCCTGAGCACGAGGATGCTGTCGGCGTCACCGTCATCGTCATCTTCACCGTCTTCTTCTGCCACCTCCTCCGAAACCAGACTACCCTTTTCTTCTCGAAACCCCAAATCCTCATTCCATCACTTCCCCCTCTTCTCCAACCCTCACACTGCTCAAAGCATGACACTTTCTAAGTGCTTCTCTCACTCTGGGCCAAACAACCCCATCCCCATCTCGGGCATGCCCGAACCCGAACCAGAGTCCGAATCCGATGCCCTTCACTCTCTTGTTGTGGTTTCCTTCTACAAGTTCGCGGATTTCCCTGACCATGCCCTTTTGCGTGACCCTTTGAAGCAACTCTGTCAACAACTGCGTGTTTCAGGTGGTATCATTCTTGCGCCTGAAGGAATCAATGGCAGCATTTGTGGCACACGGGATTCAGTGGAGAAAGTTCTTGCATTTGTGCAAAGTGATGATCGCTTAACGGGGCTCAGACATATTGAATCGCCTGTCAGTCCTGAGGAAGAAGCCATCCATCGTGGTCATCATGGACATAGTGCTAGTTCTCCTCTTGCAGCGGGGGAAGATGCACCTTTCCGATGGGATCATGTGAGAGTCAAGTTGAAGAAAGAGATTGTCACTCTTGGGATGCCTACTGTATCACCTACTGAAAGGGTTGGAAAGTATGTTAGCCCAAAAGAATGGAATGCTTTGATTAGTGATCCAGATACAGTAGTAATTGATGTGCGGAATAATTATGAAACCAGAATAGGAAAGTTTAAAGGAGCCGTTGACCCTTGTACCACATCATTTCGTGAATTCCCATCTTGGGTGGAGGAGCATTTCCAGCTTACTAGAACATATGCTGAGCATCCAAAAACTGATGTAAACAATTCAGCCCAAAGTGCTGAAAAGGAAATGGAGAATCCAAAACAACATTTGCCACGTGTTGCAATGTATTGCACTGGAGGCATTCGATGTGAGAAAGCTACAAGTCTACTTCTCAGCAAAGGTTTCAAAGAGGTGATTCTTCTTTTAAATTTTATTTTGTTTTGTTTTGTATGA 1122 0.4643 MELHPNAASMLRSRNIPTSSTPPPLLALSTRMLSASPSSSSSPSSSATSSETRLPFSSRNPKSSFHHFPLFSNPHTAQSMTLSKCFSHSGPNNPIPISGMPEPEPESESDALHSLVVVSFYKFADFPDHALLRDPLKQLCQQLRVSGGIILAPEGINGSICGTRDSVEKVLAFVQSDDRLTGLRHIESPVSPEEEAIHRGHHGHSASSPLAAGEDAPFRWDHVRVKLKKEIVTLGMPTVSPTERVGKYVSPKEWNALISDPDTVVIDVRNNYETRIGKFKGAVDPCTTSFREFPSWVEEHFQLTRTYAEHPKTDVNNSAQSAEKEMENPKQHLPRVAMYCTGGIRCEKATSLLLSKGFKEVILLLNFILFCFV. 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01734 373 Gene3D - 104 232 - -
Seca8g01734 373 CDD RHOD_YceA 246 361 - -
Seca8g01734 373 ProSiteProfiles Rhodanese domain profile. 259 364 IPR001763 -
Seca8g01734 373 Gene3D - 233 366 IPR036873 -
Seca8g01734 373 MobiDBLite consensus disorder prediction 11 60 - -
Seca8g01734 373 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 228 364 IPR036873 -
Seca8g01734 373 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 108 362 IPR020936 -
Seca8g01734 373 MobiDBLite consensus disorder prediction 1 60 - -
Seca8g01734 373 Pfam UPF0176 acylphosphatase like domain 116 231 IPR040503 -
Seca8g01734 373 SMART rhod_4 249 373 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01734 Seca-Chr8 34197383 34201316 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01734 106 369 Sulfurtransferasese or Rhodanese AT2G40760 72.388 8.23e-133 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01734 - - gmx:100784854 518.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g01734 8 34197383 34201316 Seca8g01734 8 34197383 34201316 ECH