Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01707 ATGAACATGGATTCTTCCACTTGCCCCTTCTGTCATTTATCATTTCCATCCTCCCAACTCCAATGGCACGCCAACACCCACTTCGACGATGACGATTCTCAATCTCCTCTGGGTGAACAAGCAGTTAGTGGCTTGCATTTTGATACAACTTATGGAGATTATAACAGTTGGTGTGGTGGTGGTGGAACTGGTAGAGATAATGGGGTGGGGGAAATGGATAAAAAGATCTCTTGCTTGGTTGATTTGCAAATAAGGGGCGAGTTTCACAAGGTTGAAGTGGGTTTGATGACTTTGTTGAGAAACTGTTTGGAGTCTGAAGCTGAAAACTCAAGAAGCATTTTGTCAGGTTATGTTGATCATTTCCAAAGCATTGAGTCTGAGGATGTTGGATGGGGTTGTGGTTGGCGTAACATCCAAATCCTTAGCTCACACTTACTGGCACAAATGACAGAAGCAAGAGAAGTCATGTTTGGTGGTTCAGGATTTGTTCCTGATATTCCATCACTCCAGAGATGGCTTGAGATTGCTTGGGAAAGGGGTTTTGATGAACCTGGCTCTCATCAATTCAATCATGCTATCTATGGCTCTAAAAAATGGATAGGAACCACTGAATGTGCTGCCCTTTTGCGTTCTTTTGGTATCCGAGCAAGGGTAGTGGATTTTGGTCCTAAGGAATCTGAATCTCTCTATTTATCTGTCCCTGGTTCAAGTGTTGGGACACAAGAGCTAGTGAGAACTAATGATGGAAGGAAGAGGAAAGCACCAAATGTGTATGGACCAATGGATAGATATTTGTCTCGTGGTGTTTCTCAAGCAAGTTGTAGCAAGGATGCAAAGTCATGTTCTTCCTTTATTCAGCTACATGACACTGTGGATAAAGAAAGTGGTGGAGATGAGGTGGTTAATGGTGCTGCAAAACAAAGTAAAGGTCATCAAGTTCTCATGGACTTTGTGTGGAATTATTTTTCTAACAAAAGCTCAATTCAATTTGGCCACCGGCGTGTTATTGTCAGCGAGAAAACGCCCTTGTACTTTCAACATGATGGACATTCAAGAACAATAGTTGGAATCCAAGTCAAACATCAACGTACTGGAAATCTGCAATATAATCTCCTAGTTCTGGATCCTGCTCATAGAACTGCTGCTCTAGAAAGATCACTTAGGGAGAAAGTTGGATGGCAGAAACTTGTAAAAAGAGGAGTGCATACACTGAAGAAGCCACAATACCAGTTGTGTTATGTTGATCCTGGAATTGCCAGTAAGGAGGAGATGGAAAAACTGAAGACAATTGATAGTGTCTTCCTTGAACTTTAG 1314 0.4201 MNMDSSTCPFCHLSFPSSQLQWHANTHFDDDDSQSPLGEQAVSGLHFDTTYGDYNSWCGGGGTGRDNGVGEMDKKISCLVDLQIRGEFHKVEVGLMTLLRNCLESEAENSRSILSGYVDHFQSIESEDVGWGCGWRNIQILSSHLLAQMTEAREVMFGGSGFVPDIPSLQRWLEIAWERGFDEPGSHQFNHAIYGSKKWIGTTECAALLRSFGIRARVVDFGPKESESLYLSVPGSSVGTQELVRTNDGRKRKAPNVYGPMDRYLSRGVSQASCSKDAKSCSSFIQLHDTVDKESGGDEVVNGAAKQSKGHQVLMDFVWNYFSNKSSIQFGHRRVIVSEKTPLYFQHDGHSRTIVGIQVKHQRTGNLQYNLLVLDPAHRTAALERSLREKVGWQKLVKRGVHTLKKPQYQLCYVDPGIASKEEMEKLKTIDSVFLEL. 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01707 437 Pfam Peptidase family C78 110 412 IPR012462 -
Seca8g01707 437 PANTHER ZINC FINGER PROTEIN 115 422 - -
Seca8g01707 437 Gene3D - 97 251 - -
Seca8g01707 437 Gene3D - 280 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01707 Seca-Chr8 33221589 33224935 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Seca8g01707 Peptidase_C78 2.1e-61 CL0125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01707 K24134 - gmx:100789113 717.227