Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01688 ATGGCTTCCTTATGCTACATCTTCCCCATATTTTGCATGCTCAATCTTCTACTTCTAGCCACCATAGGAACATATCCAATTACAGTTCATTCAGCTAGTCAGGTTCCAATTAATGTCACCAAACACTTCAACTTCCCAAATTTCAGCTTCAGCAATAACCCCAGATTAGTCCATGATGTCAAGCTCTTAGGTAGTGCCAAATTCTCAAATGAAAAGGGTTCTCTTCAAATCCCAAATGAATCTCAAGACACTGACACAAGACATCAAGCTGGTAGAGGCTTATATTCCTTCCCAATTAGGTTGTTAGATCCAAGTACAAAAACACCAGCTTCCTTTGAAACCACTTTTTCTTTTCAGCTGAACAATTCCACTACCTCAGAGGAAACTACTGATGGTGGTGGTAGTGGTCTCACCTTCATCATTGTCCCTGATGAGTTCACGGTAGGAAGGCCAGGGCCATGGCTTGCTATGCTCAATGATGCTTGTGAAAATGATTATAAGGCAGTGGCAGTAGAGTTTGACACAAGACAGAATCCAGAATTTGGAGACCCAAATGACAACCATGTTGGCATCAATTTAGGTACCATAATATCTACTAAAGTTATCGATGTTTCTGATGTTGGAGTGTCCCTTAAAGATGGTTTTGTTCACCATGCTTGGATCACCTATGATGGTCCTCAAAGAAGAATGGAAATTCACCTTGGATTAGCCAACCAAGAAGTTTTTCCTACCAAACCTATCTTCTCAGAAACTTTGGATCTATCTCCTTATCTAAATGAGTACATGTTTGTTGGGTTCTCAGCTTCAACAGGTAACCACACTCAAATCCACAATATACTCTCTTGGAATTTCACTTCTACAAGCCAAGCTTTTCTTCATTTCCCTTCATCTGAAACCTGCCAAGGTAAGATCTTACTTGAGAATACTACAGAAACGACAACAGCTACAAACAAGTCTCCTAAAAATGAACCTTCAAGAAGCTTTTTTATTTTTGTGGCTGTAGTGGCATTGGCTTTAGCTGTTTTTATTGGTTTTTACTTTATCAGTAAACACAGAAGAAATGCATCCAAATCAAAGACTTCAATAGAGGCAGAGATTCATAGGCCAAGGCCTCCAAACAAGCCACGTCGGTTCACATTTTCTGAGCTTTCATCTTCAACTAGATCATATAGTGAGATAGAGTTGCTTGGTAGTGATTCTAGAGGAGTGTACTACAGAGGGAAGATTAGAAATGGAAGCCAGGTAGCTGTGAAGAGATTCTCAACTCAGTTTCTCAACACACATGGATCAGATAAGAGACGTTTGTTGAAGGAAATCAAAACCATTAGCCATGTTCGCCACCCAAATTTGCTTCCTGTTAGAGGGTGGTGTCAAGATAACAATGAAATCATGGTGGTTTATGACTTTGTTCCTAATGGTAGTTTAGATAAATGGCTTTTTGGGGCTGGTGTTCTTCCATGGACTAGGAGGTTCAAAGTTGTCAAAGATGTAGCTGATGGTTTGAGTTTTTTGCATACTAAGCAACTAGCACATAAGAACTTGAAATGTAGCAGTGTGTTTCTTGATGTCAGCTTCAGAGCTGTGTTGGGGGATTTTGGATTTGTGCTATTGGGGTCAGAATCAAAACAGTTTGAGTCAGCAGTGTGTCAAGGTGCTGATGTGTTTGAGTTTGGTGTGATTGTGTTGGAAATTATAGCTGGAAGGCCAAGGGTGGAGAGAGAGGAAGGAAAACCAGAAGAGAGGAACTTGTTGGATTTTGCTTGGAACTTGCATGAGACTAATGAGAAAGTGAAGTTGGTAGATAGAAGGATGGGATCATTGATCAACTTGGATCAGGCAATTCGTGTTTTGGAAATTGGGTTGCTTTGCACTCTAAATGAGAACAAAGGGAGACCCTCAATAGAGCAAGTGGTGGAGTTTCTTCTTAACATGGAGAAGCCTATTCCTCAGTTGCCAAAAACTCGCCCTGTTGCTTTGTTCCCTTATAATAGTGCCAACACTGGACTTTGCAATACTTACTCTTGTACTTTTAAGTGA 2037 0.404 MASLCYIFPIFCMLNLLLLATIGTYPITVHSASQVPINVTKHFNFPNFSFSNNPRLVHDVKLLGSAKFSNEKGSLQIPNESQDTDTRHQAGRGLYSFPIRLLDPSTKTPASFETTFSFQLNNSTTSEETTDGGGSGLTFIIVPDEFTVGRPGPWLAMLNDACENDYKAVAVEFDTRQNPEFGDPNDNHVGINLGTIISTKVIDVSDVGVSLKDGFVHHAWITYDGPQRRMEIHLGLANQEVFPTKPIFSETLDLSPYLNEYMFVGFSASTGNHTQIHNILSWNFTSTSQAFLHFPSSETCQGKILLENTTETTTATNKSPKNEPSRSFFIFVAVVALALAVFIGFYFISKHRRNASKSKTSIEAEIHRPRPPNKPRRFTFSELSSSTRSYSEIELLGSDSRGVYYRGKIRNGSQVAVKRFSTQFLNTHGSDKRRLLKEIKTISHVRHPNLLPVRGWCQDNNEIMVVYDFVPNGSLDKWLFGAGVLPWTRRFKVVKDVADGLSFLHTKQLAHKNLKCSSVFLDVSFRAVLGDFGFVLLGSESKQFESAVCQGADVFEFGVIVLEIIAGRPRVEREEGKPEERNLLDFAWNLHETNEKVKLVDRRMGSLINLDQAIRVLEIGLLCTLNENKGRPSIEQVVEFLLNMEKPIPQLPKTRPVALFPYNSANTGLCNTYSCTFK. 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01688 678 Gene3D Transferase(Phosphotransferase) domain 1 470 650 - -
Seca8g01688 678 SUPERFAMILY Protein kinase-like (PK-like) 372 654 IPR011009 -
Seca8g01688 678 Pfam Legume lectin domain 41 289 IPR001220 GO:0030246
Seca8g01688 678 Pfam Protein tyrosine and serine/threonine kinase 394 535 IPR001245 GO:0004672|GO:0006468
Seca8g01688 678 CDD lectin_legume_LecRK_Arcelin_ConA 42 287 IPR001220 GO:0030246
Seca8g01688 678 FunFam Putative L-type lectin-domain containing receptor kinase S.7 isoform A 352 469 - -
Seca8g01688 678 FunFam Putative L-type lectin-domain containing receptor kinase S.7 isoform A 40 294 - -
Seca8g01688 678 SUPERFAMILY Concanavalin A-like lectins/glucanases 42 288 IPR013320 -
Seca8g01688 678 FunFam Lectin-domain containing receptor kinase A4.2 470 649 - -
Seca8g01688 678 MobiDBLite consensus disorder prediction 358 372 - -
Seca8g01688 678 Gene3D - 40 287 - -
Seca8g01688 678 Gene3D Phosphorylase Kinase; domain 1 360 469 - -
Seca8g01688 678 MobiDBLite consensus disorder prediction 358 378 - -
Seca8g01688 678 ProSiteProfiles Protein kinase domain profile. 390 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g01688 678 PANTHER - 76 643 - -
Seca8g01688 678 ProSitePatterns Legume lectins beta-chain signature. 169 175 IPR019825 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01688 Seca-Chr8 32759146 32761182 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01688 44 656 Receptor kinase-like Gene Family AT5G03140 32.625 3.74e-93 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Seca8g01688 PK_Tyr_Ser-Thr 8e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01688 - - lja:Lj2g3v2196570.1 1116.29