Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01685 ATGAGTGAGACAAAGAGAGAAATGGAGGCAAAGAGTGTGAATTCTGTGAAGGAATGGTTCAAGTCATCACAGGCTCTGTTAAGCATGTTGCTAGTGCAAATTTTCACAACAGGGATGCAACTTCTTTCAAGGGTCATTTTGGTTAAGGGAACTTTCATTTTTTCACTCCTTGCATATCGTCATATAGTTGCTGCTATCTGTGTTTTACCCTTTGCACTTTATTTTGAAAGGGACCGTCCAAAGAAGTTCAATTGGAGAGTTTGGTTTTGGCTCTTTGTTAATGCATTAGTGGGGATGACGATTGCAGTAGGACTATTCTATTATGGACTGAGAGACACTTCAGCCACTTACTCTGTCAATTTTCTCAACTTAGTTCCAATTTGCACCTTCTTTACCTCTATCATATGCAGAATGGAGAATCTAAGGCTGCAAACATTGGCTGGTAAAGCAAAGACAGTGGGGGCAATTTTATGTGTTGGAGGAGCATTAGTTACCAGTCTTTACAAAGGGAAGGAATTCTACCTTGGTCATCGTGAACACCAAGCTAATTTCTCTTATTTCTCTTCTACCTACACCTATTACACCTCTTATGTTTTTTTTTTTTTTTTTTTTTTTTTTTGTAAAAGTTTTATTATCCTCTTATACACATCTATTTTTCAATTTAAACAGGTCAAATTGCTTAGTGTATTTCCTTTGAGATATTGGTCAACAATGATAGCATGCATTATGGCTGCAATTCAGTCATCAATAATAGGCGTTTGCTTAGATTCCAGTAAGGCTGCTTGGACATTACGGTGGAATCTACAACTTGTAACTATAGTGTACTCGGGAGCATTGGCTACAGCTGCTACATTTACCTTGATATCTTGGGCAATTGCAATCAAAGGACCAACTTATCCCCCAATGTTCAATCCACTGGCTCTTATTTTTGTGGCAATATCAGAAGCTATCATACTTGGGGAACCACTAAGTATTGGATTGTTGGTGGGGATGGTTTTGATCATATCAGGATTGTACTCCTTTTTGTGGGGCAAAACAAATGAGAAACCACGCTTGCCTCAAACAAATGTAGCAGCTGCAGAAATGTCAACAAGCATGGCTGATGACCCTGCTATGATGCAACAATCAACAGCAGTTGTAGTACCAAGTCCTTCATCTCATGAAAGTGTAGTTCTTGAAATTGAAAAGACTGGCAAAAACTGA 1203 0.3857 MSETKREMEAKSVNSVKEWFKSSQALLSMLLVQIFTTGMQLLSRVILVKGTFIFSLLAYRHIVAAICVLPFALYFERDRPKKFNWRVWFWLFVNALVGMTIAVGLFYYGLRDTSATYSVNFLNLVPICTFFTSIICRMENLRLQTLAGKAKTVGAILCVGGALVTSLYKGKEFYLGHREHQANFSYFSSTYTYYTSYVFFFFFFFFCKSFIILLYTSIFQFKQVKLLSVFPLRYWSTMIACIMAAIQSSIIGVCLDSSKAAWTLRWNLQLVTIVYSGALATAATFTLISWAIAIKGPTYPPMFNPLALIFVAISEAIILGEPLSIGLLVGMVLIISGLYSFLWGKTNEKPRLPQTNVAAAEMSTSMADDPAMMQQSTAVVVPSPSSHESVVLEIEKTGKN. 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01685 400 Pfam EamA-like transporter family 234 341 IPR000620 GO:0016020
Seca8g01685 400 Pfam EamA-like transporter family 26 163 IPR000620 GO:0016020
Seca8g01685 400 SUPERFAMILY Multidrug resistance efflux transporter EmrE 266 345 - -
Seca8g01685 400 PANTHER WAT1-RELATED PROTEIN 26 359 IPR030184 GO:0016020|GO:0022857
Seca8g01685 400 SUPERFAMILY Multidrug resistance efflux transporter EmrE 59 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01685 Seca-Chr8 32690799 32701968 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01685 27 345 Nodulin-like Gene Family AT1G09380 33.230 5.68e-51 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01685 - - gmx:100782551 486.878