Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01676 ATGCTTTGCTCTGCTCCTGTAAGTGGTCCTTCAGAATCAGTCTCTTCTGGTGGGAAAGACAAAACCAAGAAACCTGGCCGCTATGATTTAATAGGACTGGACCCCACAAAACAGTTTTTACTTCACATAGCAACTGGAGCTGAAGTTGAAAAAGATCTTCGAATTCAGAAGAGCATATCCCGTGCAGTTGGCCAGATAGAAATAAGAGCTGATCTAATGGATGCCCACTTGTATGCATTCAAAAGATCAGTTCTACTAGAAGTTCTAGATCAGAAGGGTGCATTTCATAGCTTAAAGCATGATGTATTGCCATATCTTGTTCGGAGCCAACTGAGATCAGAAGTATTATTAAATGGTATACCACAAGCAGAAGAAAATGGAACTGAGAAGGTTATTTCTCAAAGCAATCAACAAATGCTATCTCAAATACTTGCTAATGCATCTGAACCGACCTTTCATCTACGACATGCACTGTGCCCTAACGGCTCTACTTCTGTTCGAAGAACCCATAAATGCTGTGTTTATATTGCTGGAAGCAGCAAGTACTGTGCTCGCCTAAATTCTTTACAAGCATATATTGACATAAACCGAGATGTGATAGGAGAAGCTAATCATTTGTCTGGGTATTCCTTCTCTGCTCACAACAACATTATCCATCCTTCTGCAGAGCTGGGGGCAAAAACAACTGTAGGACCACATTGTATGCTGGGGGAAGGTTCACAGATGGGTGACAAATGCAGTGTGAAACGCTCTGTCATTGGTCGTCACTGTAGGATAGGTGCCAGTGTTAAGGTTGTTAATTCGGTGGTTATGAATCATGTTACTATTGGAGACTCTTGTTCAATTCAAGGTTCTGTCATCTGCAGCAATGTACAGCTCCAAGAACGTGCTGTACTAAAAGATTGTCAAGTTGGAGCAGGTTTTGTGGTCACTGCTGGTAGTGAATGCAAAGGGGAGGTCTTGGCCAAGAAATGA 975 0.4215 MLCSAPVSGPSESVSSGGKDKTKKPGRYDLIGLDPTKQFLLHIATGAEVEKDLRIQKSISRAVGQIEIRADLMDAHLYAFKRSVLLEVLDQKGAFHSLKHDVLPYLVRSQLRSEVLLNGIPQAEENGTEKVISQSNQQMLSQILANASEPTFHLRHALCPNGSTSVRRTHKCCVYIAGSSKYCARLNSLQAYIDINRDVIGEANHLSGYSFSAHNNIIHPSAELGAKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGASVKVVNSVVMNHVTIGDSCSIQGSVICSNVQLQERAVLKDCQVGAGFVVTAGSECKGEVLAKK. 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01676 324 MobiDBLite consensus disorder prediction 1 26 - -
Seca8g01676 324 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 12 210 IPR029044 -
Seca8g01676 324 CDD LbH_eIF2B_gamma_C 235 315 - -
Seca8g01676 324 SUPERFAMILY Trimeric LpxA-like enzymes 175 310 IPR011004 -
Seca8g01676 324 Gene3D Hexapeptide repeat proteins 211 320 - -
Seca8g01676 324 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT GAMMA 1 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01676 Seca-Chr8 31964064 31969207 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01676 179 315 Eukaryotic Initiation Factors Gene Family AT4G18300 30.519 6.39e-13 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01676 K03241 - gmx:100799460 581.252