Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca8g01660 | ATGGGCCTTTCAAGTCTCCCAGCACCATCTGAAGGAGTGTTATGTGTACTTCTGGTGAACACTGTATTGTCAATATCCATATTTAAAGGCATTGTCAGAACAATCCTACACATTGTTGGTATCCATCTTTCATCATCCTCCACTTCACCAGATGCTTCTCAAAACCAACCTGAGTCACTTGAATTCCATCTTAGTCCCTCTGAGAGTTACATTGAAGAGTTCAGAAGCAGGACACCAACACTTAGGTTTGACAGTGTGTGTTGCTGTAAACTACCTGAACATGATTGCTCTGTATGTCTCACTCAGTTTGAGCCAGAATCAGAGATAAACCGCTTATCCTGTGGCCATCTCTTCCATAAAGTATGCTTGGAGAAGTGGTTGGACTATTGGAACATCACATGCCCACTTTGCAGGACTCCCTTAATGCCTGAAGATGACACACCTTGCTTTTAG | 453 | 0.4305 | MGLSSLPAPSEGVLCVLLVNTVLSISIFKGIVRTILHIVGIHLSSSSTSPDASQNQPESLEFHLSPSESYIEEFRSRTPTLRFDSVCCCKLPEHDCSVCLTQFEPESEINRLSCGHLFHKVCLEKWLDYWNITCPLCRTPLMPEDDTPCF. | 151 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca8g01660 | 150 | PANTHER | - | 1 | 145 | IPR044249 | - | |
Seca8g01660 | 150 | SMART | ring_2 | 96 | 137 | IPR001841 | - | |
Seca8g01660 | 150 | SUPERFAMILY | RING/U-box | 95 | 144 | - | - | |
Seca8g01660 | 150 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 94 | 146 | IPR013083 | - | |
Seca8g01660 | 150 | ProSiteProfiles | Zinc finger RING-type profile. | 96 | 138 | IPR001841 | - | |
Seca8g01660 | 150 | Pfam | Ring finger domain | 95 | 138 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca8g01660 | Seca-Chr8 | 31674864 | 31676681 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca8g01660 | 1 | 145 | C3H Transcription Factor Family | AT2G04240 | 64.286 | 5.65e-59 | 178 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca8g01660 | K16285 | - | gmx:100786803 | 298.13 |