Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01658 ATGGGTTGCTTTTTTGCATCCAGGGAGAGGCGTTTCCAAGTCCTAAAGTTCTGGGATAGGACATTGGTAATGCATTGTAATGGGGAAGCAGCGTGCGAACTCACTGGGGGACTCTCCTTGGTCCGTTCATCTGTGGTTAGGTGTGAAGCAGCAAGAGTGGTTTCTAGAGTAGTTACTGACTTCAGGGGGGAGTTAGCCCCTGGTGTAGAGGCAACAACATCGGTGGGAGTGGCTGGGGTAAGCACTGAACTAAATTATGCTTCCATTGGCACATTGTCTAACAACTTATTAAGCAGCAAGCAAAGCGTCAGTTTAAAGATGGGTTATTTGTGTGATTTTTGTGGAGACCAGAGGTCCTTGGTGTACTGCCGCTCTGATTCTGCCTGCTTATGTTTGTCATGTGATCGAAATGTTCATTCTGCTAATGCCCTTTCTAGGCGTCATGCAAGAACCCTTCTATGTGAGAGGTGTAATTCACAGCCTGCATATGTGAGGTGTGTAGAAGAGAAAGTTTCACTTTGTCAGAACTGTGATTGGTTGGGTCATGGTACCCCTCCATCTTCTTCGACACACAAGAGGCAATCAATCAATTGCTACTCTGGCTGCCCTTCAGCTGCAGAACTTTCTTCAATATGGTCCTTTTTCATAGATATCCCTTCTATGGGTGAAGCATGTGAGCAGGAACTGGGTTTAATGAGCATTAATGAGAACAGTGACAAAAGTGATTCAGTTCCTCCAGAAAGCCAGAATGTGTCTGGTTCAGCCCAAGTGACTGATCTACCCAGTAAGGATAAAGCTTGGGTTGGCACATCTTCAATACCTGAGTCAAGCTCAGAACCTCGTATTCTGGACCAAGCGGCTGGACCTGCCAATGAATGTATACCCAAGGTATAG 894 0.4609 MGCFFASRERRFQVLKFWDRTLVMHCNGEAACELTGGLSLVRSSVVRCEAARVVSRVVTDFRGELAPGVEATTSVGVAGVSTELNYASIGTLSNNLLSSKQSVSLKMGYLCDFCGDQRSLVYCRSDSACLCLSCDRNVHSANALSRRHARTLLCERCNSQPAYVRCVEEKVSLCQNCDWLGHGTPPSSSTHKRQSINCYSGCPSAAELSSIWSFFIDIPSMGEACEQELGLMSINENSDKSDSVPPESQNVSGSAQVTDLPSKDKAWVGTSSIPESSSEPRILDQAAGPANECIPKV. 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01658 297 CDD Bbox1_BBX-like 153 196 - -
Seca8g01658 297 ProSiteProfiles Zinc finger B-box type profile. 106 153 IPR000315 GO:0008270
Seca8g01658 297 SMART bboxneu5 154 196 IPR000315 GO:0008270
Seca8g01658 297 SMART bboxneu5 106 153 IPR000315 GO:0008270
Seca8g01658 297 CDD Bbox1_BBX-like 110 153 - -
Seca8g01658 297 ProSiteProfiles Zinc finger B-box type profile. 149 196 IPR000315 GO:0008270
Seca8g01658 297 MobiDBLite consensus disorder prediction 236 259 - -
Seca8g01658 297 MobiDBLite consensus disorder prediction 236 297 - -
Seca8g01658 297 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 107 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01658 Seca-Chr8 31580993 31585741 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01658 107 283 C2C2-CO-like Transcription Factor Family AT5G48250 60.753 3.97e-68 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01658 - - gmx:100783016 359.762