Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01657 ATGATGAATGTGCAGTTATACTGTCCCGGTAAAAAAGCTCCTGGACTATATGAATATGATGATCTGTATGATGATGATTTCATCATAGATGAAGTGGATCTTGAACTTGAGAACTATGAGGAACTTTTTGGTATGGCTCTCAGTCATTCTGAAGAGCTTTTTGAAAATGGTGGAATTAATAGCTTATTTGAGACAAAGGACATGTCTGTTAGTGCTGGTGATTCCAATTGTCAGGGTGCTGTTGCTGCTGAGGGGTCATCAGCTGGGTTGGTCAATGCTATTCAACCAGCATGCAGCAATGCAGCATCTGCAGATTCAATGTTAAGTACTAAAACTGAACCAGTTCTTTGTTTTACCGGAAGGCAATCCCAATCAAACATTTCCTTTTCTGGTGCTGCCAAAGATAGTAGTGCTGGTGACTATCAAGACTGTGGTGCTTCTTCAATGCTTCTCATGGGAGAGCCTCCCTGGTGTCCTCCTTGTCCTGAGAGTTCTATGCAATCTGCTACTCGCAGCAATGCTGTCATGCGTTATAAGGAAAAGAAAAAGACCCGGAAGTTCGACAAGAGAGTAAGGTATGCCTCTCGCAAGGCTAGGGCTGATGTCAGAAGACGTGTGAAGGGCCGGTTTGTCAAAGCTGGCGATGTCTATGATTATGACCCTTTGAGCCAAACAAGAAGCTACTGA 687 0.4367 MMNVQLYCPGKKAPGLYEYDDLYDDDFIIDEVDLELENYEELFGMALSHSEELFENGGINSLFETKDMSVSAGDSNCQGAVAAEGSSAGLVNAIQPACSNAASADSMLSTKTEPVLCFTGRQSQSNISFSGAAKDSSAGDYQDCGASSMLLMGEPPWCPPCPESSMQSATRSNAVMRYKEKKKTRKFDKRVRYASRKARADVRRRVKGRFVKAGDVYDYDPLSQTRSY. 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01657 228 Pfam CCT motif 171 213 IPR010402 GO:0005515
Seca8g01657 228 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 23 215 - -
Seca8g01657 228 ProSiteProfiles CCT domain profile. 171 213 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01657 Seca-Chr8 31576289 31579804 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01657 20 228 C2C2-CO-like Transcription Factor Family AT3G07650 58.216 2.61e-76 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Seca8g01657 CCT 1.6e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01657 - - gmx:100787695 351.673