Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01644 ATGGAACCCGTTCTCCTCCAAATTCTGAGATGGCTGATGCAGCCAAAGGTATTTAGAATTGTGTGTTTCGTTTCATCTCTTGTTGGACTGATTTGTTACGCTCTCAGCTCCTCCTTCAACCATTTATTCGGAAAATGGACATTGTTGAAGATAATTCTTTATAGTATATTTAGTTTCATCATCTGTCTCGCCATCCTGTTTGCAAAGGCATGGCAACGCTCACCTAATCTCCAACTCAAAGCTCATTTGGCATTTTTGGTTTTGATCATCGCCACTGCATACTCATTTTTTTTCGATAAAGTAGTAACCGGGAAACCAGATGCATATAGCTTGATTTCATGTGCAGCATTTGCTATCATGTCGGTCAGCTTGTCAAGGCAGACTCACTGTGGAATCGAGGTTGATCTCCTTTATTTCTTCTGCGGATGTTTAATAGCACAACTCATGAAGATAAAATTATTGTTAGTGTTTGTTGGAGCGGGTTTCAGTTATCCCCTCATCATTGTCCGTTCCTATTTGAATTCCCCAACAGAGAGTAGTTACCATGGGCATGGGCTTGGGCTTGGAGCCCAAGCCCAAGATCAACAGAGCGTAGTGATCCGAGTCCATTTAGATCCAGAAGAAACCAATACTGGTAGTACTTTGACTTTTGCTGAAACTGGGGATCTTGAACGACAAGATCAATTGGTAGTTACTTTCAATCAAGTGGATTCTCATTCACAACAAGGCAATATCGATATCGATATCGATAGGGATCTTATCCTGCCACAGCTCATGACTTGTATAAAGGATCTTAGAAAGGAGAATCGAAAGCTCATCCGCATGGTTTCCAAACTCATTGACTTAGCAGATAAGGACCAGATTCTGGAGTCTGACCACAACTTGGTGATGGATGCGTTGCCGCCGGGAATTATCAACGAGCTTCACGAAGCGGTGAAGCTTATGGTGGGAGCTGGATTTGAGGAGGAATGTTGCGATGTTTACAGTAATTGCCGGAGGGAATTTGTGGAAGAGTGCCTGTCGAGATTTGGATTGAGAGAGCTCAACATTGAGGAGATTGAAGAGACAGGGGAGATTGAGAGATGGATTAGAGCTTCTAATTTTGCACTGAGAGTACTGTTTCCCAATGAAAAGAAACTCTGCGATCGCATATTCTTCGGTTTCTCTGCTGCGGCAGGTGTTTCTTTCATGCAAGTTTGTAGGGAATTGACTGTTGGTCTTCTGAATTTTGCCAATACATGCTTTGCAACTGGGAAACGTTCGCCGAGTCTTCTGCGCGGCATCCAGACTTTAAGTGACTTGATTCCAGAGTTTGAATCATTGTTTTCTGATCCGTACAGTGTATCATTAAGAAATGACGCGCTCAGTGTTCAGAAAACGTTGGCCATTTCCATGGAGTTTGATAATCTTGTTTACCGTCCTAGAATAATGGTTTGA 1437 0.4266 MEPVLLQILRWLMQPKVFRIVCFVSSLVGLICYALSSSFNHLFGKWTLLKIILYSIFSFIICLAILFAKAWQRSPNLQLKAHLAFLVLIIATAYSFFFDKVVTGKPDAYSLISCAAFAIMSVSLSRQTHCGIEVDLLYFFCGCLIAQLMKIKLLLVFVGAGFSYPLIIVRSYLNSPTESSYHGHGLGLGAQAQDQQSVVIRVHLDPEETNTGSTLTFAETGDLERQDQLVVTFNQVDSHSQQGNIDIDIDRDLILPQLMTCIKDLRKENRKLIRMVSKLIDLADKDQILESDHNLVMDALPPGIINELHEAVKLMVGAGFEEECCDVYSNCRREFVEECLSRFGLRELNIEEIEETGEIERWIRASNFALRVLFPNEKKLCDRIFFGFSAAAGVSFMQVCRELTVGLLNFANTCFATGKRSPSLLRGIQTLSDLIPEFESLFSDPYSVSLRNDALSVQKTLAISMEFDNLVYRPRIMV. 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01644 478 Coils Coil 262 282 - -
Seca8g01644 478 SUPERFAMILY Cullin repeat-like 259 462 IPR016159 -
Seca8g01644 478 Gene3D Exocyst complex component Exo70 251 474 - -
Seca8g01644 478 PANTHER EXOCYST COMPLEX PROTEIN EXO70 258 464 IPR004140 GO:0000145|GO:0006887
Seca8g01644 478 Pfam Exo70 exocyst complex subunit 360 462 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01644 Seca-Chr8 31162416 31163852 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01644 291 473 EXO70 exocyst subunit family AT5G58430 52.020 1.32e-59 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01644 - - aprc:113848415 503.442