Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01617 ATGCACCCCGTTTTATACTTCAAATTAATAAACGTGGCCTATCACACCATAATGCAAATGGAGACCCTCCCTCTCCTCCTCACCCTAACAGCTCTCATATCTGCTTATTTCCTTTGGTTCCATTTCCTCTCTCGAACCCTAACCGGGCCAAAAGCCTGGCCCATAGTGGGAAGCCTGCCGGGCCTATTCAAGAACCGGAACCGGGTCCATGATTGGATCGCCGGGAACCTCCGTGCAACTGGCGGTTCAGCCACCTACCAAACTTGCATCATCCCTCTCCCTTTCTTGGCTCACAAGCAAGGGTTCTACACTGTCACGTGTCACCCTAAGAACCTCGAACACATCCTGAAAACCCGGTTCGATAACTACCCTAAAGGGCCCAAGTGGCAGACCGCATTTCATGACCTGTTGGGCCAAGGCATATTCAACAGCGACGGTGAAACGTGGCTCATGCAACGCAAAACCGCAGCTCTAGAATTCACAACACGAACACTAAAGAATGCCATGGCTCGTTGGGTGAACCGTGCCATTAAGAGCCGCTTATGGTGCATTTTAGATAAAGCAGCTAAGGATAATGTTTCAGTGGATTTGCAAGACCTTCTTCTACGCTTAACTTTTGATAACATTTGTGGACTTACCTTTGGTAAAGACCCGGAAACACTTTCCCCGGAACTACCCGAAAACCCGTTTGCTGTTGCTTTTGACACTGCCACCGAAGCCACCATGCTTAGGTTCCTCTACCCGGGTCTTGTTTGGAGGTTCCAGAAACTTCTTAATATTGGACCCGAGAAGAGGTTGAAGCAGAGCCTCCAAATCGTCGAAACCTACATGAACGACGCCGTTTTGGATCGCAAGGAATCCCCCTCTGATGACTTGATGTCACGTTTCATGAAGAAACGCGACGCCGACGGAAAACCCATCCCCGCCGCCGTGCTGCAACGCATCGTTTTGAACTTCGTCCTCGCTGGACGTGACACGTCATCGGTTGCGCTCAGCTGGTTCTTCTGGCTCGTCATGAACCATCCCAATGTGGAAGAGAAGATAGTGAAGGAGATAACGTCGGTTCTCGAGGACACTCGTGGCGGAGAACGGCGGAGATGGACGGAGGAGCCTCTGGATTTCTTCGAAGCGGATCGGTTAGTTTACTTGAAAGCTGCGTTGGCCGAAACGCTGCGTTTGTACCCGTCGGTGCCGCAGGATTTCAAGCAGGCCATCGCTGATGACGTGTTGCCGGACGGTACGGTGGTTCCGGCGGGTTCGACGGTGACGTATTCGATTTATTCGGTTGGGAGGGTGGAGACTATATGGGGTGAGGATTGCATGGAATTTAAACCGGAGAGGTGGCTTTCGGTTCGAGGTGACCGGTTCGAACCGCCAAAGGATGGGTTCAAGTTCGTTGCTTTTAATGCTGGACCGAGAACCTGTTTGGGGAAGGACTTGGCTTACCTGCAGATGAAGTCAGTGGCTGCGGCTGTTCTGTTGCGTTACCGGCTATCTCTGGTTCCCGGTCACCGGGTGGAGCAGAAGATGTCTCTTACCTTGTTCATGAAGAATGGGCTCAAGGTGTTCTTGCATCCACGTCAGCTTCAAGATGGGCCAAGGGTTGCCACCTCAGCATAG 1620 0.5185 MHPVLYFKLINVAYHTIMQMETLPLLLTLTALISAYFLWFHFLSRTLTGPKAWPIVGSLPGLFKNRNRVHDWIAGNLRATGGSATYQTCIIPLPFLAHKQGFYTVTCHPKNLEHILKTRFDNYPKGPKWQTAFHDLLGQGIFNSDGETWLMQRKTAALEFTTRTLKNAMARWVNRAIKSRLWCILDKAAKDNVSVDLQDLLLRLTFDNICGLTFGKDPETLSPELPENPFAVAFDTATEATMLRFLYPGLVWRFQKLLNIGPEKRLKQSLQIVETYMNDAVLDRKESPSDDLMSRFMKKRDADGKPIPAAVLQRIVLNFVLAGRDTSSVALSWFFWLVMNHPNVEEKIVKEITSVLEDTRGGERRRWTEEPLDFFEADRLVYLKAALAETLRLYPSVPQDFKQAIADDVLPDGTVVPAGSTVTYSIYSVGRVETIWGEDCMEFKPERWLSVRGDRFEPPKDGFKFVAFNAGPRTCLGKDLAYLQMKSVAAAVLLRYRLSLVPGHRVEQKMSLTLFMKNGLKVFLHPRQLQDGPRVATSA. 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01617 539 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 468 477 IPR017972 GO:0005506|GO:0016705
Seca8g01617 539 Pfam Cytochrome P450 104 517 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g01617 539 PRINTS E-class P450 group I signature 475 498 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g01617 539 PRINTS E-class P450 group I signature 465 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g01617 539 PRINTS E-class P450 group I signature 311 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g01617 539 PRINTS E-class P450 group I signature 384 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g01617 539 PRINTS E-class P450 group I signature 331 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g01617 539 CDD CYP86A 89 520 - -
Seca8g01617 539 Gene3D Cytochrome P450 44 536 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g01617 539 PRINTS P450 superfamily signature 466 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g01617 539 PRINTS P450 superfamily signature 385 396 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g01617 539 PRINTS P450 superfamily signature 475 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g01617 539 PRINTS P450 superfamily signature 322 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g01617 539 FunFam Cytochrome P450 41 530 - -
Seca8g01617 539 SUPERFAMILY Cytochrome P450 38 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g01617 539 PANTHER CYTOCHROME P450 39 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01617 Seca-Chr8 30628652 30631218 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01617 20 527 Cytochrome P450 AT5G58860 75.294 0.0 805
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01617 K15401 - gmx:100788343 944.11