Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01595 ATGGATAACAACAAACCCCCTTATGTAACTTCAACACCAAACTTGAACGTGAAATCAAAACAATCACCATCATCATCATCACCGTGTCCTGCACCAAAAGTTTCAACTACCACCTTAGACTTCGGTTGCTTTAACCATGACATTAGTGAGTTGCCTAATAATTCTCTGAGAAATATAGGCCACAGGCACACCCAGTCTGAGATTCTCACCCTCCTTGATGATATTAGCATCGACGATTATCTTGGCACCATGGATGGTCACTCACTCTCAGGTGGCACCATTGAGAAAGACTCGCTCTCCACCTACCTTAATATGGATAAACAAAACCCATCCCCCGGTGCCCTTGCATCTGCTGTAGACATCTTTTTTATTGCTATTGGTAATACCAATATCAATGAAAGAATTGATGTTGGGTCCCAACATAGCCTATTTATGAATGGTTCAACATCCATAATCAAACCTGATGTGTTGGTCTCTGCTTCTGCAAATGGATCTACTATTAACTCAAAACAAGCAATATCTGCTTTTTCTATTGGTACTTGCATCGACGATGATCTTGGTACCATGGTTGGTCACTCATTTTTTGATGATACCATTGGGAATGATTTGCTTTCCACCTTCCTCAATATGGATAAACTAAACCCATCCTCTGGTGCTCTTGCATATACTGCAAACAACTTTCCTATTGCTAGTGGTACTACCAATATCAATGAAAGGCTTGGCGTTGGGTCCCAACATAGCCAATTTATGAATGGTTCAACATCCATCATCAAACCTAACATGTTGGTCTCTACTTCTGAAAATAGCTCTACTATGAACTCAAAAAAAGCAATGTCTGCTTTTTCTATTGGTACTTGTATCAATGATGATCTTGGCATCATGGATAGTCACTCACTCTCCAATGTCACCATTGAGGAAGACTTGCTCTCCACATACCTCAATATGGATAAAATAAACCCATCCTCTTGTGCCCTTGCATCTGTTGGAGATAACTTTTCTATTGCTATTGGTACTACCAATATCAATGAAAGGCTTGACGTTGGGTCCCAAAATAGCCAATTTATGAATGGTCCAACATCCATAATCAAACCGGACATGTGGGTCTCTGCTTTTGAAAATGGCTCTACTATTAACGCAAAACAAACAATGTCTGCCTTTTCTATTGGTACTTGGATCGATGATGATCTTGGTGCTATGGATGGTCAGTCACTCTGTGATGGTACCACTGAGAAGGACGTTTTCTCCACTTACCTCAATATGGATAAACTAAACCCATCCTCTGGTGCTCTTGCATCTACTGCAGACAACTTTTTTATTGCTAATGGTACTACCAATATCAATGGAAGGCTTGACGTTGGGTCCCAACATAGCCAATTTATGAATGGTTCAACATCCATCATCAAACCTAACATGTTGGTCTCTGCTTCTGAAAATGGCTCTACTATTAACTCAAGAAAAGCAATGTCTGATACTGAGCTTGCGCAGCTTGCCTTGGTTGACCATAAGTGTTCTAAAAGGATTTTGGCAAATAGACAGTCTGCTATAAGATCAAAGGAAAGGAAGGCGCGTTACATTTCGGAACTTGAAAAGAAGGTGAAAACATTGGAAACTGAAAAGACATCCTCATCTACACAATTAACTATCTTGCAAAGGGATACACAAAGAAATGATCATGAGAATAATGAGTTAAAGTTGGGGTTGCAAACTCTGATACAACAAATTCAATTGGATGTCGGTGAGTTCTTGCTGCTATAA 1755 0.3989 MDNNKPPYVTSTPNLNVKSKQSPSSSSPCPAPKVSTTTLDFGCFNHDISELPNNSLRNIGHRHTQSEILTLLDDISIDDYLGTMDGHSLSGGTIEKDSLSTYLNMDKQNPSPGALASAVDIFFIAIGNTNINERIDVGSQHSLFMNGSTSIIKPDVLVSASANGSTINSKQAISAFSIGTCIDDDLGTMVGHSFFDDTIGNDLLSTFLNMDKLNPSSGALAYTANNFPIASGTTNINERLGVGSQHSQFMNGSTSIIKPNMLVSTSENSSTMNSKKAMSAFSIGTCINDDLGIMDSHSLSNVTIEEDLLSTYLNMDKINPSSCALASVGDNFSIAIGTTNINERLDVGSQNSQFMNGPTSIIKPDMWVSAFENGSTINAKQTMSAFSIGTWIDDDLGAMDGQSLCDGTTEKDVFSTYLNMDKLNPSSGALASTADNFFIANGTTNINGRLDVGSQHSQFMNGSTSIIKPNMLVSASENGSTINSRKAMSDTELAQLALVDHKCSKRILANRQSAIRSKERKARYISELEKKVKTLETEKTSSSTQLTILQRDTQRNDHENNELKLGLQTLIQQIQLDVGEFLLL. 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01595 584 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 500 563 IPR004827 GO:0003700|GO:0006355
Seca8g01595 584 SMART brlzneu 498 562 IPR004827 GO:0003700|GO:0006355
Seca8g01595 584 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 35 576 - -
Seca8g01595 584 SUPERFAMILY Leucine zipper domain 504 553 IPR046347 GO:0003700|GO:0006355
Seca8g01595 584 Coils Coil 518 545 - -
Seca8g01595 584 MobiDBLite consensus disorder prediction 1 32 - -
Seca8g01595 584 CDD bZIP_plant_RF2 505 554 IPR044759 GO:0003700|GO:0006355
Seca8g01595 584 Gene3D - 501 557 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01595 Seca-Chr8 29967228 29969431 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01595 392 576 bZIP Transcription Factor Family AT1G06070 49.754 3.23e-44 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01595 - - gmx:100786738 145.591