Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01586 ATGGGTAGTTACCGGGTCTGCGTCTGCTTCCAGCGGAGGTTCAAGACGGCGGAGGCGGTGGCGCCACAAGATGTAAGAGACCTCTTCCACAAGTACTCCGAGGGTGGGGCCCACATGACACCTGACCAGCTCCGCCGCTTCCTCACGGAGGTTCAGGGCGAGGTGATGATGATCGACGATGACCACCCTCAGAAGGTGGTGGAGCAAGTGTTGCATAAGCGCCATCACATTACGAAGTTCGCTAGGCACAATCTCACCCTCGATGACTTTCATCACTACCTCTTCTCCCCTGACCTCAATTCTCCCATTAGATCTCAGGCAATGGTTCATCAGGATATGACAGCTCCGTTGTCCCATTATTTCATATATACTGGCCATAACTCCTACCTCACTGGAAATCAACTCATAGGTGATTGTAGTGATGTCCCCATTATAAAGGCATTGAATAGAGGTGTGAGAGTGGTGGAGCTTGATATATGGCCCAATTCCACCAAAGATGATGTGCATGTTTTACATGGATGGACATTGACAATCCCTGTGGAGCTCATCAAATGTTTGAAATCCATTAAAGAACATGCCTTCTCTGCATCTCCCTACCCAGTTATAATAACTCTTGAAGACCATCTTACACCAGACCTTCAAGCTAAAGTTGCTCAGATGATTACTCAAACATTTGGAGATATGTTGTTCTGTCCAAATGATGAAGAATTAAAAGTTTTTCCTTCACCTGAAGAATTGAAGTATCGGATCATGATATCAACAAAACCTCCAAAAGAGTACCTAAAATCTGAAAGCATGAAGGAAAGTTCCAAAACATTGGTGAAATTAAAGGATTCTGATGAAGATGAATGGGGAAAGGAGGCCGTTGGTGTTGCAAAAGCCCAAAATGAAGATGATATGGGTAACTCTGACACAAATAATCAGAGTGATGATGATGAATCAAACGATGATGACTATGAAACAAATCAGCCCAGTGATTACAAGCGTCTAATTGCTATACATGCAGGAAAACCCAAGGGCAGTGTGAAGGAAGCATTAAAAGTTGAAGATGATAAAGTTAGACGCCTTAGCTTAAGTGAACAAGCCCTTGAAAAGGCTGCTGAGTCACTCGGAACTGATCTTATTAGATTCACCCAGAAAAACTTTTTGAGGGTGTACCCCAAGGGTACTCGGTTCGACTCCTCCAACTACATGCCACTAGTTGGCTGGATGCATGGTGCTCAAATGGTTGCATTCAATATGCAGGGATATGGCAGAAATCTTTGGTTGATGCATGGAATGTTTAGATCCAACGGGGGATGTGGTTATGTCAAAAAGCCAGACTTTCTTATGAATGTAGATCCAAATAATGAGGTATTTAATCCTAAAGATGAGTTGCAAGTGAAGAAGACTCTAAAGGTGAAAATATATCTGGGAGATGGATGGCGTATGGATTTCAAACAAACTCACTTTGACATGTTTTCTCCGCCAGATTTTTATGTCAAGGTTGGTATAGCCGGAGTGCCAGCTGATGTAACAAAGAAGAAAACGAAGACAATAGAGGATAATTGGATTCCTACTTGGGAAGAAGAGTTCACCTTCCCTTTAACTGTCCCTGAACTTGCTTTACTCAGAGTGGAAGTGCATGAATATGACATGGCTGAGAAGGATGATTTCGCAGGCCAAACTTGTTTACCCATCACTGAACTGAAACAAGGGATCCGTGCAGTTCCACTCTTTGATAATAAAGGAGAGAAGTACAACTCAGTTAGGCTTCTTATGCGATTTGAGTTCATTTAA 1779 0.43 MGSYRVCVCFQRRFKTAEAVAPQDVRDLFHKYSEGGAHMTPDQLRRFLTEVQGEVMMIDDDHPQKVVEQVLHKRHHITKFARHNLTLDDFHHYLFSPDLNSPIRSQAMVHQDMTAPLSHYFIYTGHNSYLTGNQLIGDCSDVPIIKALNRGVRVVELDIWPNSTKDDVHVLHGWTLTIPVELIKCLKSIKEHAFSASPYPVIITLEDHLTPDLQAKVAQMITQTFGDMLFCPNDEELKVFPSPEELKYRIMISTKPPKEYLKSESMKESSKTLVKLKDSDEDEWGKEAVGVAKAQNEDDMGNSDTNNQSDDDESNDDDYETNQPSDYKRLIAIHAGKPKGSVKEALKVEDDKVRRLSLSEQALEKAAESLGTDLIRFTQKNFLRVYPKGTRFDSSNYMPLVGWMHGAQMVAFNMQGYGRNLWLMHGMFRSNGGCGYVKKPDFLMNVDPNNEVFNPKDELQVKKTLKVKIYLGDGWRMDFKQTHFDMFSPPDFYVKVGIAGVPADVTKKKTKTIEDNWIPTWEEEFTFPLTVPELALLRVEVHEYDMAEKDDFAGQTCLPITELKQGIRAVPLFDNKGEKYNSVRLLMRFEFI. 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01586 592 SMART plcy_3 327 444 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Seca8g01586 592 Pfam Phosphatidylinositol-specific phospholipase C, X domain 113 255 IPR000909 -
Seca8g01586 592 SMART plcx_3 111 255 IPR000909 -
Seca8g01586 592 MobiDBLite consensus disorder prediction 291 326 - -
Seca8g01586 592 SUPERFAMILY EF-hand 9 113 IPR011992 -
Seca8g01586 592 PRINTS Phospholipase C signature 382 403 IPR001192 GO:0035556
Seca8g01586 592 PRINTS Phospholipase C signature 558 568 IPR001192 GO:0035556
Seca8g01586 592 PRINTS Phospholipase C signature 142 162 IPR001192 GO:0035556
Seca8g01586 592 PRINTS Phospholipase C signature 239 256 IPR001192 GO:0035556
Seca8g01586 592 PRINTS Phospholipase C signature 116 134 IPR001192 GO:0035556
Seca8g01586 592 PRINTS Phospholipase C signature 403 421 IPR001192 GO:0035556
Seca8g01586 592 SMART C2_3c 464 572 IPR000008 -
Seca8g01586 592 SUPERFAMILY PLC-like phosphodiesterases 111 445 IPR017946 GO:0006629|GO:0008081
Seca8g01586 592 FunFam Phosphoinositide phospholipase C 20 105 - -
Seca8g01586 592 CDD C2_PLC_like 462 591 - -
Seca8g01586 592 CDD PI-PLCc_plant 110 431 - -
Seca8g01586 592 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 8 591 IPR001192 GO:0035556
Seca8g01586 592 ProSiteProfiles C2 domain profile. 438 574 IPR000008 -
Seca8g01586 592 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 355 442 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Seca8g01586 592 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 111 255 - -
Seca8g01586 592 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 464 591 IPR035892 -
Seca8g01586 592 Gene3D - 20 103 - -
Seca8g01586 592 MobiDBLite consensus disorder prediction 304 320 - -
Seca8g01586 592 FunFam Phosphoinositide phospholipase C 459 592 - -
Seca8g01586 592 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 357 443 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Seca8g01586 592 Gene3D Phosphatidylinositol (PI) phosphodiesterase 108 456 IPR017946 GO:0006629|GO:0008081
Seca8g01586 592 Pfam C2 domain 465 566 IPR000008 -
Seca8g01586 592 Gene3D C2 domain 458 592 IPR035892 -
Seca8g01586 592 Pfam Phosphoinositide-specific phospholipase C, efhand-like 23 99 IPR015359 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01586 Seca-Chr8 29443869 29447926 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01586 1 592 Acyl Lipid Metabolism Gene Families AT5G58700 63.591 0.0 775
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01586 K05857 - tcc:18590491 890.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g01586 8 29443869 29447926 Seca8g01586 8 29443869 29447926 ECH
Seca8g01586 8 29443869 29447926 Seca6g02095 6 80903761 80916563 ECH
Seca8g01586 8 29443869 29447926 Seca6g02097 6 80921968 80949072 ECH