Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01581 ATGAAGCTCTTGACATCATCTTTTTCATCATCTCCATCATCTTCATCCACCTTCAGTTTTGACCCAACTTTGTGCCACTCCAAAAGTGCTGCTGCTACTGCAGGGTGTCTCACAGCTATTCTGCGCAGGATTCTCTGTTCTGGTGGCCTTCCAACACACCCTTCAGACCAAATTAGAGAACTTGATTCAATGTCAATTGTGGGTGGCAAAGTTCAAAACTTTAAGAAGAGTGAATGTGCTAATAGTCCTAATTCTACAACAAGTGCTCCTGGGGTAGTGGCAAGGTTAATGGGTTTGGATTCAATGGGAGAGAGAGAGATACCCAATGAAGCAAACTCAAATTCACTTTCACGTAGCCGATCCATGAACTCTGTGGATTACTTAGGGGAATGCAAGAGAATGGAGGGTCTACATAGACGTGTTAAATCTTCTTCTTCTTCTTCATTTCGTGAGGTGCCAACTTTTCATTTGGTTGAAAATGAGAACTTTTTGGTATTCAGCTTTGAAAGTGAAGGTGAGAGTAAAGAATTCAAGTCCAGAGGGAGAAGAAAAGAAACGGGTTGTGCAGAGTTGAAGCAGAAACGAAGAGAGAGAGGTGAGTTGAAGAAGAACAAGAGAGAAAAAGTTGATGATGAGAAGGGGAACGTGAACAGAAAGGTGTCTGATATGTCTGATGTTAATGTGGGAAATGGTGTACCTCAATTTGGTAACACTTTGTTCAGAAGTATTGATTTAGAAGCAGAGAGATTCTCACAGACCATGAAGCGTAAGGAAGTTACCAGTGGTGAGAAAGTGAAGAGGAGAAAGAGAGGAATGGCATGTTACACAGAAAAGAAGGTAGAAACTGAATGTGGTTCAGAAGATTCAAGCCCAGTTTCTGTATTTGATTTTGAGCGCGAAGCTGCTGAAACAGAGGTAGACTTTTTTGGTGTTGATAAGAGTTGGAGAAGAAAATTGTCACCAGAGCTTGAAAATGACCAGCCCTTTGTTCTGCATTCTGATGGTAATTTGATGATTGATGAGAGGGATGTTAAGGCAAATGAGAACAGCAAACATGAAGGATCCAAGAAAAAAGAGAAGCAAAGCCAGGAATGTGGAGATGTTTGGGGTGAAATTTGTAGGCTAGTTGAAGGTGAATTGGTTGGATCAAATCAGTTGCAAGAAGTAATGAGGAAACAAGGTGATTTAGAGAGTATAAGTGCAGATTTTGAGTCAGAAATTTTTGATGACTTGTTAAATGAGCTTATAGATCAATTAGTTGGTAATTCCTTGAAAGCATTGCAAATTCAAAATTTGTAA 1299 0.4003 MKLLTSSFSSSPSSSSTFSFDPTLCHSKSAAATAGCLTAILRRILCSGGLPTHPSDQIRELDSMSIVGGKVQNFKKSECANSPNSTTSAPGVVARLMGLDSMGEREIPNEANSNSLSRSRSMNSVDYLGECKRMEGLHRRVKSSSSSSFREVPTFHLVENENFLVFSFESEGESKEFKSRGRRKETGCAELKQKRRERGELKKNKREKVDDEKGNVNRKVSDMSDVNVGNGVPQFGNTLFRSIDLEAERFSQTMKRKEVTSGEKVKRRKRGMACYTEKKVETECGSEDSSPVSVFDFEREAAETEVDFFGVDKSWRRKLSPELENDQPFVLHSDGNLMIDERDVKANENSKHEGSKKKEKQSQECGDVWGEICRLVEGELVGSNQLQEVMRKQGDLESISADFESEIFDDLLNELIDQLVGNSLKALQIQNL. 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01581 432 PANTHER OS05G0128300 PROTEIN 17 422 - -
Seca8g01581 432 MobiDBLite consensus disorder prediction 1 20 - -
Seca8g01581 432 MobiDBLite consensus disorder prediction 193 228 - -
Seca8g01581 432 Coils Coil 191 211 - -
Seca8g01581 432 Pfam DUF761-associated sequence motif 87 102 IPR032795 -
Seca8g01581 432 MobiDBLite consensus disorder prediction 193 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01581 Seca-Chr8 29316109 29318333 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01581 29 419 TRM (TON1 Recruiting Motif) Superfamily AT5G58630 28.643 3.95e-23 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01581 - - lja:Lj2g3v2277510.1 451.44