Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01579 ATGTCAATTATGGGTGGCAAAGTTCAAAACTTTAAGAAGAGTGAATGTGCTAATAGTCCTAATTCTACAACAAGTGCTCCTGGGATAGTGGCAAGGTTAATGGGTTTGGATTCAATGGGAGAGAGAGAGATACCCAATGAAGCAAACTCAAATTCACTTTCACGTAGCCGATCCATGAATTCTGTGGATTACTTAGGGGAATGCAAGAGAATGGAGGGTCTACATAGGCGTGTTAAATCTTCTTCTTCTTCGTTTCGTGAGGTGCCAACTTTTCACTTGGTTGAAAATGAGAACTTTTTGGTATTTAGCTTTGAAAGTGGAGGTGAGAGTAAAGAATTCAAGTCCAGAGGGAGAAGAAAAGAAACGGGTTGTGCAGAGTTGAAGCAGAAACAAAGAGAGAGAGGTGAGTTGAAGAAGAACAAGAGAGAAAAAGTTGATGATGAGAAGGGGAAATTGAGCAAAAGGGTGTCTGATATGTCTTATGTTAATGTGGGAAATGATGGTGAAGTACAATTTGGTAACACTTTGTTCAGAAGCATTGATTTAGAAGCAGAGAGATTCTCAAAGCCCATGAAGCGTAAGGAAGTTACCAATGGTGAGAAAGTGAAGAGGAGAAAGAAAGGAATGGCATGTTACACAGAAAAGAAGGTAGAAAGTGAATGCGGTTCAGAGGATTCAAGCCCACTTTCTGTATTTGATTTTAAGCGCAAAGCTGCTGAAACAGGTTTGTTTCTTACTACAATACTTGTTTAA 753 0.3944 MSIMGGKVQNFKKSECANSPNSTTSAPGIVARLMGLDSMGEREIPNEANSNSLSRSRSMNSVDYLGECKRMEGLHRRVKSSSSSFREVPTFHLVENENFLVFSFESGGESKEFKSRGRRKETGCAELKQKQRERGELKKNKREKVDDEKGKLSKRVSDMSYVNVGNDGEVQFGNTLFRSIDLEAERFSKPMKRKEVTNGEKVKRRKKGMACYTEKKVESECGSEDSSPLSVFDFKRKAAETGLFLTTILV. 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01579 250 MobiDBLite consensus disorder prediction 111 151 - -
Seca8g01579 250 MobiDBLite consensus disorder prediction 1 29 - -
Seca8g01579 250 Pfam DUF761-associated sequence motif 24 39 IPR032795 -
Seca8g01579 250 Coils Coil 127 147 - -
Seca8g01579 250 MobiDBLite consensus disorder prediction 12 28 - -
Seca8g01579 250 PANTHER OS05G0128300 PROTEIN 15 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01579 Seca-Chr8 29234924 29235676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01579 26 239 TRM (TON1 Recruiting Motif) Superfamily AT5G58630 28.111 3.14e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01579 - - lja:Lj2g3v2277510.1 252.292