Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01568 ATGGGGTCATGGCACCCGGGGAAAGTAATTCGTTGTGGGAGAGAAAAGCGACATATAAGATATGACAATATTATTGATATTGATGGAGTAAACTATGTCGTGGAAGCGGTGAGGGTTCCCAATGTTTTGGATGGTGTTAATTCTCCTTCAGTTTCTTGGAGTGAACGTGGGCACATTAGACCAAAACCTCCCGTGATTGAATTTGGAGAAAGGGACCTTTCATTTGGTCTCTGTGTTGATGTGAATTATCAGGATGCTTGGTGGGAAGGTGTTATATTTGATCATTGTGATCAAATGAATGAGAGGAGTGTGTTATTCCCTAATTTAGGGGATGAAATGAAGGTTGGAATTCAACAACTGAGGATCACTCAGGACTGGGATGAAGTTACTGAGTATTGGAAGACAAGAGGGAAGTGGGTGTTTCTTGAATTATTTGAGGAGTGTGAGCAGGTATCTTATATTGGAGCTTTAGCAAAGCAGATTTGGTATGATGTGAGAGTAAGAGAAGATTTTGAATCCATAAAAGACTGGTATTGCAATGTGAAAGACTTGTGGAGGGACCCTGTAGTGAAGGTAGTTGGTGACTATTATACCCTCACACTACAAGAAATCTTCCCATCCATAAACCTTCATGAGGATTTGTTGAGAGGAACACCAGAACTGGAGTTATCTCAACCCATTGATAATAATCACAATGATTCTAGTCATAATGATGTATCTGGCTCTGATTGTGATATGGATAAGAATTGTGATGCCATAATTCTCATTCCAGAGGAACATGGTACTGATCATTCACTTGACTCTGATTCTGGATCTGAAAAGCCTAAAGAAAATTGTGATAGTATCATTCCAATCCAAGAGGAGTATGATACTGACAACGCTCTTTGTGATACTAATCACAATAATGTATTGGGTTCTGACATTGCAATAAGTGAGAGCCCTGAGGAAAAATATGATACTGATCTAAACTGTGGGAACATCATTCCCAGTGAAGAGCAATATGGTACAAGTTCTATGGTTGAAGGGGAACTTGAGAAGGATATTCCTTTATCTCCACTTCAAGAGGATTTTCCTGAGTCTGAAACAGAAACTACAAGCGATGATGATGATGTTGAAGAAAATTCAGGTTCTAGTAGTTCTGTAAAAAGAAATAAACGTAGGCGCTCAACATCCATAGCTTGGAATATTCTGACACTGGATGATGTTGAACCCTTCCCTGAAGTTATTGATGAATATATAGCTGGATGTAGGAGCAAGACGATTAGGGAACAATTGAAGACAAAAGTAAAACAACATCTTACATATCTTGGATGGACAATTGAATGGACTTCAAATAAACATGATCCTTGA 1350 0.3881 MGSWHPGKVIRCGREKRHIRYDNIIDIDGVNYVVEAVRVPNVLDGVNSPSVSWSERGHIRPKPPVIEFGERDLSFGLCVDVNYQDAWWEGVIFDHCDQMNERSVLFPNLGDEMKVGIQQLRITQDWDEVTEYWKTRGKWVFLELFEECEQVSYIGALAKQIWYDVRVREDFESIKDWYCNVKDLWRDPVVKVVGDYYTLTLQEIFPSINLHEDLLRGTPELELSQPIDNNHNDSSHNDVSGSDCDMDKNCDAIILIPEEHGTDHSLDSDSGSEKPKENCDSIIPIQEEYDTDNALCDTNHNNVLGSDIAISESPEEKYDTDLNCGNIIPSEEQYGTSSMVEGELEKDIPLSPLQEDFPESETETTSDDDDVEENSGSSSSVKRNKRRRSTSIAWNILTLDDVEPFPEVIDEYIAGCRSKTIREQLKTKVKQHLTYLGWTIEWTSNKHDP. 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01568 449 MobiDBLite consensus disorder prediction 311 330 - -
Seca8g01568 449 MobiDBLite consensus disorder prediction 351 384 - -
Seca8g01568 449 Pfam Agenet domain 2 64 IPR008395 -
Seca8g01568 449 SMART agenet_At_2 71 128 IPR014002 -
Seca8g01568 449 MobiDBLite consensus disorder prediction 360 374 - -
Seca8g01568 449 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 2 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01568 Seca-Chr8 28843790 28845139 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01568 1 223 PHD Transcription Factor Family AT5G58610 42.667 1.12e-54 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01568 - - gmx:100806062 378.252