Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01565 ATGGCTGAGGCCTTACTTGGAGTTGTGTGTGAGAATTTGCTCTCTCTGGTTCAAAATGAATTTGCAACCATTTCTGGAATCAAGGAGAAGGCTGTAAAGCTATCAAGCACCCTCGATCTGATCAAGGCCGTACTTGAAGATGCTGAGGAGAAACAACTAACAAACCGTTCTATAAAGGTTTGGCTACAACAACTCAGAGATGCAGCATACGTGCTAGATGATATCCTTGATGAATGTTCCATAGAATCCCATCGACTTGGGGGATTATCCTCTTTCAAACCAAACAACATCATGTTTCGCCGTAAGATTGGCAAGAGGTTGAAAGAGATTACAAGGAGATTTGATGAAATTGCTGAGAGTAAGAACAAGTTTCTTCTAACAGAGGGTGTTAGGGAAAGGTCAACTGAAGTGGCTGAATGGCGCCAAACCAGCTCAGTCATTCCCCAACCGAAAGTATATGGACGAGAAGACGATAAGGAGAAGATTGTGGAGTTTCTGCTTAGCCAAGCACAGGGCCATGACTTCCTTTCAGTCTATCCCATCATTGGCTTAGGTGGTGTTGGGAAAACAACACTTGCTCAAATGGTCTACAATGATGACCGGGTAAGTAGAACTTTTAACACAAAAATTTGGATATGCATTTCAGAGAATTTCTCTGTCAAGAGAATTCTATGTTCTGTCGTAGAATCTGTCACAGGAGGAAAGTATGATGCCCATGATTTAGATGTAATAGAAAGAAAAGTGCAAGAGTTGTTGCAAAGTAAAAGATATTTGCTGATTTTAGATGATGTATGGAAAAGAAATAAAGAAAAATGGAACAAGTTGAAATCCGTGTTGTCATGTGGATCCAAAGGTTCTTCTGTTTTAGTTTCCACTCGTGATAAGGATGTTGGGGCAATCATGGGAACCTGCCAAGCTCATTACTTGGGTGGTCTCTCTGAGGATGATTGTTGGTTGTTGTTCAAACAATATGCATTTGGACCTGATAAAGAAGAGCGTGCAGAGCTTATAGCAATAGGCAAGGAGATAATAAAGAAGTGTGGGGGATTGCCTCTTGCAGCACAAGCATTAGGAGGTCTATTGCGCTCAAGGAGTGAGGAAAAGGAATGGCTTGAAGTTAAGGAAAGTAGGCTTTGGACTTTATCTGATGAAAATTCTATTTTGCCTGCCTTGAGGTTGAGTTACTTTCATTTAACGCCAACCTTGAAGCAATGTTTTGCTTTCTGTGCCATACTTCCCAAAGATACAAAAATCATGAAAGAAGAGTTGATTCATCTTTGGATGGCGAATGGATTTATTTCATCTCGGGCAAACTTGGAGGTAGAAGATGTTGGCAATATGATTTGGAATGAATTATATAAAAAATCATTCTTCCAAGAAGTCGAGATGGATGATTATACTGGAAAAATTTCTTTCAAGATGCATGATCTTGTTCATGATCTTGCTCAGTCAGTAACTGGGCCAGAGTGTATGTTTTTTGAGAATGCTAACATGATTGATTTGTCAAGAAGCACACACCATATTGGTTTTTCTCATGGTCTATTGTCGTCCAGTAAGAGACTCGGGAAAGAAGTTGAATCCTTGCGAACATTGTATCAGGTATATTACTATGTTTGTAAGGATGAAATTTCTGGTTCCTTCACACGTTCTCTTCGGGTTTTACATGCAACACGCTTCACATTACCACCACCGGAGAATCTAATTCATTTGAGGTATTTGGCGCTTATTAAATTTAAGATAACAAAAATCCCTGACTCAATTTATAACTTGCGGAAATTGGAAATCTTGAAACTAAAATCTCTTTGGGAACTTAATTGTCTACCGAAACGCTTGACTTGCTTACAGAAACTCAGACATCTTGTCATTGAAAATTGCCCATCATTGTCTTGTATGTTCCCTAACATTGGAAAATTATCTTGCCTAAAAACATTAAGTGTATACATTGTCAATTCTAAGACAGGGCACAGCTTGGCAGAGTTACATAACCTGAAGTTGGGAGGAAAACTGAGCATCCAAGGCCTAAAAAATGTTGGCAGTTTAAGTGAAGCTAGAGAGGCCAATTTGATAGATAAAAAAGACCTATGGGAATTAACCTTGTCATGGGAGAATGGTGATGATGAAACTGAGTCACATGCTACTAATCCCGACCAAGTTCTGGAAGGGCTTCAACCTCACTCTAATCTCAAGGCATTGGTAATACGTGGATATGAAGGGCTACACTTTCCGAGTTGGATGGGAATTCTAGGTAGTTTAGTTAGTCTTTGTCTTAAAGATTGCAAGAACTACACACAACTTTCACTTGTTAGTAAACTACCATCTCTGAGAAGACTCGAGATAAGTTCTATGGATAATGTGCAATACTTGGATGACAATGAATCTCATAGTGGGGTGGAGGGGACGGCTTTCCCATCTTTGGAGGAGCTCAGGTTAGGACAGTTACCCAAGTTAGAGCGTTTGTTGAAAGTGGAAAGAGGGGAGATGTTCCCCCGTCTTTCTGATTTGGACATAGGCAAATGCCCTAAACTTGTGTTGCCATGCCTTCCATCTGTGAAAAACCTCTATGTATTTCAGTGTAACAATGAGTTCCTGAGGTCAATCTCTAGTCTAAAAGGACGTGATGAAGAACGCATTTGCTTCCCTGGGGGAATGTTGAGAAATCTGACTTGTCTTGAGCATCTGCGAATATATGGTTTTTCGAAATTGAAGGAATTACCAAATGAATTCTCTAACCTCAAAGCTTTGCGAATGTTGGAGTTATGGTACTGTGATAAGCTGGAGTCTTTACCTGAACAAGGTTGGGAAAGTCTATGCTCCCTTCAAACTTTGAGCATTGATAACTGTATAGGATTGAGATCCTTACCGGAAGGTGTTCGACACCTCACTTCACTTGAGTACATCACTATTAGGAGTTCCCCAACATTAGAGGAGCGGTGTAAGGAGGGAACAGGGGAGGATTGGGACAAGATAGCGCACATTCCATACAAAACAATCTGCTCCTAG 3000 0.4037 MAEALLGVVCENLLSLVQNEFATISGIKEKAVKLSSTLDLIKAVLEDAEEKQLTNRSIKVWLQQLRDAAYVLDDILDECSIESHRLGGLSSFKPNNIMFRRKIGKRLKEITRRFDEIAESKNKFLLTEGVRERSTEVAEWRQTSSVIPQPKVYGREDDKEKIVEFLLSQAQGHDFLSVYPIIGLGGVGKTTLAQMVYNDDRVSRTFNTKIWICISENFSVKRILCSVVESVTGGKYDAHDLDVIERKVQELLQSKRYLLILDDVWKRNKEKWNKLKSVLSCGSKGSSVLVSTRDKDVGAIMGTCQAHYLGGLSEDDCWLLFKQYAFGPDKEERAELIAIGKEIIKKCGGLPLAAQALGGLLRSRSEEKEWLEVKESRLWTLSDENSILPALRLSYFHLTPTLKQCFAFCAILPKDTKIMKEELIHLWMANGFISSRANLEVEDVGNMIWNELYKKSFFQEVEMDDYTGKISFKMHDLVHDLAQSVTGPECMFFENANMIDLSRSTHHIGFSHGLLSSSKRLGKEVESLRTLYQVYYYVCKDEISGSFTRSLRVLHATRFTLPPPENLIHLRYLALIKFKITKIPDSIYNLRKLEILKLKSLWELNCLPKRLTCLQKLRHLVIENCPSLSCMFPNIGKLSCLKTLSVYIVNSKTGHSLAELHNLKLGGKLSIQGLKNVGSLSEAREANLIDKKDLWELTLSWENGDDETESHATNPDQVLEGLQPHSNLKALVIRGYEGLHFPSWMGILGSLVSLCLKDCKNYTQLSLVSKLPSLRRLEISSMDNVQYLDDNESHSGVEGTAFPSLEELRLGQLPKLERLLKVERGEMFPRLSDLDIGKCPKLVLPCLPSVKNLYVFQCNNEFLRSISSLKGRDEERICFPGGMLRNLTCLEHLRIYGFSKLKELPNEFSNLKALRMLELWYCDKLESLPEQGWESLCSLQTLSIDNCIGLRSLPEGVRHLTSLEYITIRSSPTLEERCKEGTGEDWDKIAHIPYKTICS. 1000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01565 999 Gene3D - 401 484 IPR036388 -
Seca8g01565 999 Gene3D Ribonuclease Inhibitor 516 871 IPR032675 -
Seca8g01565 999 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 138 409 IPR027417 -
Seca8g01565 999 SUPERFAMILY L domain-like 828 972 - -
Seca8g01565 999 PRINTS Disease resistance protein signature 909 925 - -
Seca8g01565 999 PRINTS Disease resistance protein signature 347 361 - -
Seca8g01565 999 PRINTS Disease resistance protein signature 178 193 - -
Seca8g01565 999 PRINTS Disease resistance protein signature 251 265 - -
Seca8g01565 999 Gene3D - 134 306 IPR027417 -
Seca8g01565 999 Gene3D - 6 119 - -
Seca8g01565 999 Pfam NB-ARC domain 155 394 IPR002182 GO:0043531
Seca8g01565 999 CDD RX-CC_like 2 119 IPR038005 -
Seca8g01565 999 FunFam Probable disease resistance protein At1g61300 134 306 - -
Seca8g01565 999 Pfam Rx N-terminal domain 6 87 IPR041118 -
Seca8g01565 999 FunFam Probable disease resistance protein At1g63360 395 484 - -
Seca8g01565 999 Gene3D Ribonuclease Inhibitor 877 990 IPR032675 -
Seca8g01565 999 PANTHER DISEASE RESISTANCE PROTEIN RP 42 822 IPR044974 GO:0006952
Seca8g01565 999 SUPERFAMILY L domain-like 473 864 - -
Seca8g01565 999 Coils Coil 31 51 - -
Seca8g01565 999 Gene3D - 311 399 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01565 Seca-Chr8 28673798 28676842 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01565 181 646 WRKY Transcription Factor Family AT5G45050 23.483 9.63e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01565 - - mtr:11405813 1201.04