Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01540 ATGTTTGCCCCAGTTGTTGCAGCATGGCTTTTGTGTATCAGTGGTATTGGTATATACAACATATTCCACTGGAACCCACAAATATACCGTGCACTTTCTCCAGTTTATATGTTGAGGTTCCTCAAAACCACTGGCATTGAAGGATGGATGTCATTAAGTGGAGTGGTGCTATCAATCACAGGAGTGGAGACAATGTATGCTGACTTGGGTCATTTTTCTGCACTCTCAATAAAGATAGCTTTCACATGTCTAGTATATCCCTGCCTGATTTTGGCATACATGGGTGAGGCTGCATTTCTCTCTAAGCACCATTATGACATCCAGAGAAGTTTCTACAGAGCCATACCAGAAGCTGTATTTTGGCCAGTTTTTATAGTGGCCACTTTTGCTGCAGTAGTAGGAAGTCAAGCAGTAATTTCTGCTACTTTTTCCATCATAAGCCAATGCTGTGCATTAAATTGTTTTCCTCAGGTGAAGATTGTTCACACTTCAAGCAAAATATATGGGCAGATTTATGTTCCAGAAATCAATTGGATACTAATGTGCCTTTGTTTAGCTGTCACAATTGGCCTAAGGGATACAAACATGATGGGCCATGCATATGGACTGGCTATCACAACTGTTATGTTTGTGACAACATGCTTGATGACACTAGTAATTGTGATTGTCTGGAAGCAGGGGATAATAAAAGCCCTCATATGTTTACTGTTGTTTGGATCAATTGAACTTCTTTACATCTCAGCTTCAATCTGCAAAGTCCCTGAAGGAGGGTGGATCCCACTTGTGCTATCTTTTATTTTTATGGGCATAATGTTCACTTGGAACTATGGAACAATGAAGAAACACCAATTTGATGTGGAAAACAAGGTTTCAATGAGCAAGATACTATCTTTAGGACCTTGCTTAGGTATGGTCCGTGTCCCTGGAATAGGACTAATTTTCAATAATCTAACTTCAGGTATCCCTGCTATTTTTGGCCATTTTGTTACAAACTTGCCAGCATTTCATCAGGTGTTAGTTTTTGTATGTGCCAAATCAGTTCAAGTCCCTTATGTCAGTGAAAGTGAAAGATTGGTCATTAGTAGGATTGGTCCAAAGGTGTACCGCATGTTTCGTTGCATTGTAAGATATGGTTACAAAGACATGCAACAAGAGAATTACAATTTTGATAATAAGTTGGTATCTGCAATAATACAATTTGTAGAACAAGAGGAGAGTGTTCCAGAACCAACACATGAATTGTCTACGGATGATCATGATGGAAACTTAAATGTGGAAAACATCGGTGCTTCACAATCACAACACACTTTGAATTGTGAAAATAATTTGTTACCATTTTCATGTGTTTTGAGGGAGATGAAGGATGGTGGTTGCAATCTTCAAGAGTGTCCCTATAAAGATGAGTCTTTGCAGATTTTAAAGGCCAAAGAGTCTGGTGTTACTTATATACTTGGACATTCCTATGCAGAGGCAAAAAAATCATCCTCCATTGTAAAGAAATTTGCAATTGATGTTGTTTATGCTTTTCTAAGCAAGAATTGCAGAGACCCTGATATTGTTCTGGATGTAGCTCACACTTCTTTGCTAGAAGTTGGTATGGTTTACCATGTTTAA 1614 0.3848 MFAPVVAAWLLCISGIGIYNIFHWNPQIYRALSPVYMLRFLKTTGIEGWMSLSGVVLSITGVETMYADLGHFSALSIKIAFTCLVYPCLILAYMGEAAFLSKHHYDIQRSFYRAIPEAVFWPVFIVATFAAVVGSQAVISATFSIISQCCALNCFPQVKIVHTSSKIYGQIYVPEINWILMCLCLAVTIGLRDTNMMGHAYGLAITTVMFVTTCLMTLVIVIVWKQGIIKALICLLLFGSIELLYISASICKVPEGGWIPLVLSFIFMGIMFTWNYGTMKKHQFDVENKVSMSKILSLGPCLGMVRVPGIGLIFNNLTSGIPAIFGHFVTNLPAFHQVLVFVCAKSVQVPYVSESERLVISRIGPKVYRMFRCIVRYGYKDMQQENYNFDNKLVSAIIQFVEQEESVPEPTHELSTDDHDGNLNVENIGASQSQHTLNCENNLLPFSCVLREMKDGGCNLQECPYKDESLQILKAKESGVTYILGHSYAEAKKSSSIVKKFAIDVVYAFLSKNCRDPDIVLDVAHTSLLEVGMVYHV. 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01540 537 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 536 IPR003855 GO:0015079|GO:0016020|GO:0071805
Seca8g01540 537 Pfam K+ potassium transporter 1 381 IPR003855 GO:0015079|GO:0016020|GO:0071805
Seca8g01540 537 NCBIfam potassium uptake protein 1 537 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01540 Seca-Chr8 27047340 27050577 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01540 1 537 Inorganic Solute Cotransporters AT2G30070 66.108 0.0 737
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01540 K03549 - gmx:100798458 921.383