Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01535 ATGGCGATGACGGCGTGCGCGACGATGGACTTAGCTCGCGCGGCGGCGTGCCGTGACGGCGCGGCGGCGGCTCACCTCAAAGTGATATCGATCTTCGTCATCTTCTTCACCAGCGCCGCCGGCATGTCATCGCCGGTGGTGCTTGCCCGTATTTTCCAGGGAAAACCGTTATACGACAGAGCTGTGGTGGCTATCAAGTGCTTTGCCGCTGGAGTCATCCTATCCACCTCCCTCGTCCACGTGCTCCCTGACGCGTACGCCTCACTCGCGGACTGCCACGTGGCAACGCGTCATCCCTGGAAGGATTTCCCCTTCGCAGGGCTCGTGACTTTGGTTGGGGCACTGCTTGCGCTGTTGGTGGACCTCGCCGCGAGCTCACACGTGGAGCACGCTCAGTACGCGCCGGTGGTTGCGGTGGAGAAGGAATCGGCAGTTGAACTCGGAGGCGGTTGCGGCGGCGTCAGCGGCGGTGGAGGAGAAGCGGAAGGTGAGAGGGGTGAAGAGTTGGTTAAATTGAAGCAGAGATTGGTTTCGCAGGTTCTAGAAATTGGGATAATATTTCACTCAGTGATCATTGGGGTCACTATGGGAATGTCTCAGAACGTTTGCACCATTAGACCTCTTGTTGCTGCTTTGGCATTTCATCAAATATTTGAAGGCATGGGTCTCGGTGGCTGCGTTGCTCAGCAGGCGGGATTCAGCTTTGGAACAATGGCATACATGTGCTTCATGTTCTCAGTGACAACACCAATGGGGATAATTTTGGGTATGGGATTATTCTCACTGACAGGTTTAGATGATAGTAGCCCAAATGCCTTAATCATGGAAGGGTTACTGGGTTCAATTTCTTCAGGAATATTGATTTACATGGCTCTTGTTGATCTCATAGCCGTTGATTTCTTTCACAACAAGCTTATGAACTCTGATCCACGGTTGAAAAAGGCATCTTTTGTTGCCTTAACCCTTGGTTCTGCAGCAATGTCTATTCTCGCCCTCTGGGCTTGA 1005 0.5294 MAMTACATMDLARAAACRDGAAAAHLKVISIFVIFFTSAAGMSSPVVLARIFQGKPLYDRAVVAIKCFAAGVILSTSLVHVLPDAYASLADCHVATRHPWKDFPFAGLVTLVGALLALLVDLAASSHVEHAQYAPVVAVEKESAVELGGGCGGVSGGGGEAEGERGEELVKLKQRLVSQVLEIGIIFHSVIIGVTMGMSQNVCTIRPLVAALAFHQIFEGMGLGGCVAQQAGFSFGTMAYMCFMFSVTTPMGIILGMGLFSLTGLDDSSPNALIMEGLLGSISSGILIYMALVDLIAVDFFHNKLMNSDPRLKKASFVALTLGSAAMSILALWA. 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01535 334 NCBIfam ZIP zinc/iron transport family 14 334 IPR004698 GO:0005385|GO:0016020|GO:0071577
Seca8g01535 334 Pfam ZIP Zinc transporter 25 331 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Seca8g01535 334 PANTHER ZINC/IRON TRANSPORTER 23 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01535 Seca-Chr8 26921358 26925222 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01535 3 334 Inorganic Solute Cotransporters AT2G30080 64.306 1.85e-155 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01535 K14709 - gmx:100797310 494.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g01535 8 26921358 26925222 Seca8g01535 8 26921358 26925222 ECH
Seca8g01535 8 26921358 26925222 Seca6g02622 6 89955984 89960114 ECH
Seca8g01535 8 26921358 26925222 Seca6g02622 6 89955984 89960114 PCT