Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01534 ATGGCATTCAAGGAGTTCATAATCAGAAGCTATGAATGTCAATCTGATAGAGCTCAAGTTGAAGATCTTGAAAGAAGATGCAAAGTAGGACCATCACAAAGCGTGTTAGACACTATGGGTGACCCCATTTGTAGGATTCGAAACAGTCCCATCTACATGATGCTGGTAGCAGAGGTGGACAATGAATTGGTTGGTGTCATTCAAGGCTCAATAAAAGTGGTCACAGTTCAAAGTCATCCTCCAAAAGATTTGGCAAAGGTAGGCTATGTCCTAGGCCTAAGGGTTGCTCCTCATAGTAGGAGACAAGTCATTGGCTCTAGCCTAGTGCAAAGGCTAGAAGAATGGTTCATTTCCAATGATGTGGACTATGCATATGTGGCTACAGAGAAAGACAACCATGCTTCAATGAGTCTTTTCATGGAGAAATTTGGCTACACCAAGTTTAGGACTCTGGCTGTACTCATAAATCCTGTGAATCAACACTCATTTCAAATCTCATCCAACATTGAGATAGCTAGGGTCAAGATTGAAAAGGCTGAATCTCTCTATAGAAGATTCATGGGCTCCACTGAGTTTTTTCCTAATGACATAGAAAATATACTAAAGAACAAGCTTAGCTTGGGAACATGGGTGGCTTATTTCAAAGAAGATAGTGGGTGGTTAGATATTGAGTCAGATGGAAAAGTCCCCTGTAGTTGGGCTATGCTTAGTGTATGGAACAGTGGAGAAATCTTCAAGTTAAGGCTAGGGAAAGCACCTTTATCTTGCTTGTTATTCACAAAGAGTTGGAGCTTGATTGGTAAAATTTTTCCATGCTTGAAATTGCCTACCTTGCCTAATTTCTTCAACCCATTTGGGTTCTACTTCATGTATGGGGTGTACCATGAAGGGCCATTCTCTGAGAAGCTAGTGAGGGCCTTGTGCCAATTTGTGCACAACATGGCTGCAAAGTCCAAGAGTGAGAATTGCAACATCATTGTAACAGAAGTTGGAGGACAAGATGAGCTCAATCATCATATCCCACATTGGAAATTGCTCTCATGCCCGGATTTGTGGTGCATAAAGGCCTTGAAAAATGAAAGGACAAAGATGTTTTGTGAATTAACCAACACCCCACCAAGAGCACTCTTTGTAGACCCAAGAGAGGTCTAA 1152 0.4158 MAFKEFIIRSYECQSDRAQVEDLERRCKVGPSQSVLDTMGDPICRIRNSPIYMMLVAEVDNELVGVIQGSIKVVTVQSHPPKDLAKVGYVLGLRVAPHSRRQVIGSSLVQRLEEWFISNDVDYAYVATEKDNHASMSLFMEKFGYTKFRTLAVLINPVNQHSFQISSNIEIARVKIEKAESLYRRFMGSTEFFPNDIENILKNKLSLGTWVAYFKEDSGWLDIESDGKVPCSWAMLSVWNSGEIFKLRLGKAPLSCLLFTKSWSLIGKIFPCLKLPTLPNFFNPFGFYFMYGVYHEGPFSEKLVRALCQFVHNMAAKSKSENCNIIVTEVGGQDELNHHIPHWKLLSCPDLWCIKALKNERTKMFCELTNTPPRALFVDPREV. 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01534 383 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 6 159 IPR000182 GO:0016747
Seca8g01534 383 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 4 383 - -
Seca8g01534 383 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 15 150 IPR016181 -
Seca8g01534 383 CDD NAT_SF 54 126 - -
Seca8g01534 383 Gene3D - 8 155 - -
Seca8g01534 383 Pfam Acetyltransferase (GNAT) family 43 145 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01534 Seca-Chr8 26869084 26870375 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Seca8g01534 Acetyltransf_1 6.4e-14 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01534 - - gmx:100799507 633.254