Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01531 ATGTTCTTTAGCTTTTCTATTTTTTTTAATGTAAATATTGTAAATAAATCATTTCATTTATTAAAAATAATTTTTAAAACTATTTTATTAAATAATTTTCAAAAATTAAAAAATAAAAATGAATCAAACACAATTTCTTCTCTTGATAGCAGAACTCTTTCAAATCGATATGCTGCAAGAAGATCCAGATTGAAGAAACTTGAATATGAAGCAGATATGGAAAACAAAGCAAAATCTTATGAGGAAATGGTAGCCATTCTCCATGCGCAAGTTGAAACCCAAAAAAATCAGAGGCGGCTTTTGCAAATTGAGCAACATAGATTGAAACTATATATGGCTGCTTCTGAAAAGCAAAGAGTACTTCAAGAAGATGACTTTCTCTCGTCTCTTTAA 393 0.2799 MFFSFSIFFNVNIVNKSFHLLKIIFKTILLNNFQKLKNKNESNTISSLDSRTLSNRYAARRSRLKKLEYEADMENKAKSYEEMVAILHAQVETQKNQRRLLQIEQHRLKLYMAASEKQRVLQEDDFLSSL. 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01531 130 Coils Coil 77 97 - -
Seca8g01531 130 Pfam Basic region leucine zipper 51 96 IPR004827 GO:0003700|GO:0006355
Seca8g01531 130 SMART brlzneu 46 107 IPR004827 GO:0003700|GO:0006355
Seca8g01531 130 SUPERFAMILY Leucine zipper domain 51 98 IPR046347 GO:0003700|GO:0006355
Seca8g01531 130 Gene3D - 49 117 - -
Seca8g01531 130 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 51 65 IPR004827 GO:0003700|GO:0006355
Seca8g01531 130 PANTHER BASIC LEUCINE ZIPPER 34 50 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01531 Seca-Chr8 26819356 26819905 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01531 51 127 bZIP Transcription Factor Family AT3G58120 32.468 7.67e-08 47.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca8g01531 bZIP_2 1.5e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01531 - K09060 gmx:102664191 97.8265