Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01529 ATGGATAACAATAAACTCCCTTATGTTACTTCAACACCAAACCTAAACGTGAAATCGAAACAACCATTATCGTCATCATCATCGTATCCTCCACCAACAATTCTAGCTACAACCCCAGACTCACCTAGCTTTAACAATGACATTATTGAGATGCCTAATAATCCTCCTGGAAATACAAGTCACAAGGGCGCTCGATCTAAGATTCTCATCCTCCCTGAAGATATCAACATCGACAGTGATATCGACACCACGAATAGCCTCTCACTTTTTGATGACACTGTTGAGGGAGTCTTGTTTTCCGTCTACCTCGATATGTATAAACTAAACTCATCCTCTGGAGGCCATGATACTATTGTAGAAAATTTTTCTATTGATATTGGTAATACCAGTATTAATGAAAGGCTCGAGGTTGGGCACCGACATAGCCAGTCAATAAATGGATCAACATCCATCGTCAAACCTGACATTCCGGTTTCTGCTTTTGAAAATGGATCTATGATTGCTTCAAGGAAAGCAATGTCCGTTGGCGAACTTGTAGAGCTTGCCAAGGTTGATCCTAAGCGTCTTGAAAGGTCTCAAGTTGGTTGGTTGGCAATGGATAACAACAAACTCCCTTATGTTACTTCAACACCAAACCTGAATGTGAAATCAAAACAACCATTATCGTCATCATCATCGTATCCTCCACCAACAATTCTAGCTACAACCCTAGACTCAACTAGCTTGAACAATGATATTAGTGAGATGTCTAATAATCCTCCTGGAAATACAAGCCACAAGCGCGCTCGATCTGAGATTTTCACCCTCCCTAAAGATATCAACATCGAAGGTGATATTGACACTATGGATGGCCTCTCACTTTTTGATGATACCGTTAAGGAAGACTTGTTTTCCGTCTACCTCAATATGAATAAACTAAACCCATCCTCTGGAGCCCATGATACTGTTATAGAAAACTTTGCTATTGATATTGGTAATACCACTATTAATGAAAGGCTCAAGGTTGGGCACCAACACAGTCAGCCCATAAATGGATCAACATCCATCATGAAACCTGACATTCCGGTTTCTACTTCTGAAAATGGATTTGTGATTGTCTCAAGGAAAGCAATGTCCGCTGGCGAACTTGTAGAGCGCGCCAAGGTTGATCCTAAGCATGCTGAAAGGTGTCAAGTTGGTTTGTTGGCAATGGATAACAATAAACTCCCTTATGTTACTTCAACACCAAACCTGAATGTGAAATCGAAACAACTATTATCGTCATCATCATCGTATCCTCCACCAACAATTCTAGCTACAACCCCAGACTCAACTGGCTTGAAGAATGACATTAGTGAGATGCCTGATAATCCTCTTGGAAATACAAGCCACAAGCGCGCTCGATCTGAGATTCTCACCCTCCCTGCAGATATCAATATCGATAGTGATATTGACCCCATGGATGGCCTCTCACTTTTTGATGACACCGTCAATGGAGACTTGTTTTCCGCCTACCTCAATATGGATAAACTAAACCCATCCTCTGGAGCCCATGCTACTGTTGTAGAAAACTTTGCTATTGATATTGGTAGTACCAATATCAGTGAAAGGCTCGAGGTTGGGCACCGACATAGGCAATCCATAAATGGATCAACATCCACCATCAAACCTGACATTCCAGTCTCTGCTTCTGAAAATGGCTCTATGATTGCTTCAAGGAAAGTAATGTCCGGTGCCGAACTTGTAGAGCTTGCAAAGGTTGATCCTAAGCGTGTTGAAAGGATATGGGCAAATAGACAGTCTGTTGCAAGATCAAAGGAAAAGAAGACACGTTACATTTTTGAGCTTGAAAATAAGGTTCAAAAATTGGAAACTGAAGTTACATCCTTGTCTACACAATTAACTATCTTGCAAGTATGCCTTAACTCATTATCTGTATCTTATAGGGATACACAAAGAATGGCTACTAAGAATGATGAGTTAAGGTTGCAGTTGGAAACCAAGCGACAACAACTTCAATTGCAAAATGCATTGAAGAACTCATCTGGAGAGGAAATCCAACATTTGTCACTACTAATTGGGCAAGCTATGCCAAATGGAGGACCTATGAACTCTGTTGCATTTGGAAGGGGGCAACAATACTCTCCTAATACACTGGACACATATGCTCTTTTAGCAGCACAACAATTACAACAACCTCAAAGTCATTCCCAGATGCAGCATCACCAACTTCAGTAG 2217 0.41 MDNNKLPYVTSTPNLNVKSKQPLSSSSSYPPPTILATTPDSPSFNNDIIEMPNNPPGNTSHKGARSKILILPEDINIDSDIDTTNSLSLFDDTVEGVLFSVYLDMYKLNSSSGGHDTIVENFSIDIGNTSINERLEVGHRHSQSINGSTSIVKPDIPVSAFENGSMIASRKAMSVGELVELAKVDPKRLERSQVGWLAMDNNKLPYVTSTPNLNVKSKQPLSSSSSYPPPTILATTLDSTSLNNDISEMSNNPPGNTSHKRARSEIFTLPKDINIEGDIDTMDGLSLFDDTVKEDLFSVYLNMNKLNPSSGAHDTVIENFAIDIGNTTINERLKVGHQHSQPINGSTSIMKPDIPVSTSENGFVIVSRKAMSAGELVERAKVDPKHAERCQVGLLAMDNNKLPYVTSTPNLNVKSKQLLSSSSSYPPPTILATTPDSTGLKNDISEMPDNPLGNTSHKRARSEILTLPADINIDSDIDPMDGLSLFDDTVNGDLFSAYLNMDKLNPSSGAHATVVENFAIDIGSTNISERLEVGHRHRQSINGSTSTIKPDIPVSASENGSMIASRKVMSGAELVELAKVDPKRVERIWANRQSVARSKEKKTRYIFELENKVQKLETEVTSLSTQLTILQVCLNSLSVSYRDTQRMATKNDELRLQLETKRQQLQLQNALKNSSGEEIQHLSLLIGQAMPNGGPMNSVAFGRGQQYSPNTLDTYALLAAQQLQQPQSHSQMQHHQLQ. 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01529 738 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 27 191 - -
Seca8g01529 738 MobiDBLite consensus disorder prediction 418 441 - -
Seca8g01529 738 Coils Coil 599 626 - -
Seca8g01529 738 SUPERFAMILY Leucine zipper domain 583 637 IPR046347 GO:0003700|GO:0006355
Seca8g01529 738 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 581 631 IPR004827 GO:0003700|GO:0006355
Seca8g01529 738 Gene3D - 582 635 - -
Seca8g01529 738 CDD bZIP_plant_RF2 584 631 IPR044759 GO:0003700|GO:0006355
Seca8g01529 738 SMART brlzneu 579 643 IPR004827 GO:0003700|GO:0006355
Seca8g01529 738 Coils Coil 651 671 - -
Seca8g01529 738 MobiDBLite consensus disorder prediction 1 39 - -
Seca8g01529 738 Pfam Basic region leucine zipper 580 627 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01529 Seca-Chr8 26722062 26729265 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01529 419 720 bZIP Transcription Factor Family AT1G06070 45.597 8.97e-76 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca8g01529 bZIP_2 1.2e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01529 - - pcin:129313665 263.077