Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01528 ATGGATAACAATAAACTCCCTTATGTTACTTCAACACCAAACCTAAACGTGAAATCGAAACAACCATTATTGTCATCATCATCTTATCCTCCACCAACAATTCTAGCTACAACCCCAGACTCACCTAGCTTTAACAAAGACATTATTGAGATGTCTAATAATTCTCCTGGAAATACAAGCCACAAGCGCGCTCGATCTGAGATTCTCATCCTCCCTGAAGATGTCAACATCGATGGTGATATCGACACCACGAATAGCCTCTCACTTTTTGATGACACTGTTGAGGGAGTCTTGCTTTCCGTCTACCTCGATATGTATAAACTAAACTCATCCTCTGGAGGCCATGATACTATTGTAGAAAATTTTGCTATTGATATTGGTAACACCAGTATTAATGAAAGGCTCGAGGTTGGGCACCGACATAGCGAGTCCATAAATGGATCAACATCCATCATCAAACCTGACATTCCGGTTTCTGCTTCTGAAAATGGATCTATGATTGCCTCAAGGAAAGCAATGTCCGCTGGAGAACTTGTAGAGCTTGCCCAGGTTGATCCTAAGCATCTTGAAAGGTCTCAAGTTGGTTGGTTGGAAATGGATAACAACAAACTCCCTTATGTTACTTCAACACCAAACCTGAATGTGAAATCAAAACAACCATTATCGTCATCATCATCGTATCCTCCACCAACAATTCTAGCTACAACCCTAGACTCAACTAGCTTGAACAATGACATTAATGAGATGTCTAATAATCCTCCTGGAAATACAAGTCACAAGCGCGCTCGATCTGAGATTTTCACCCTCCCTAAAGATATCAACATCGAGGGTGATATTGACACTATGGATGGCCTCTCACTTTTTGATGACACCGTTGAGGAAGACTTGTTTTCCGTCTACCTCAATATGAATAAACTAAACCCATCCTCTGGAGCCCATGATACTGTTGTAGAAAAGTTTGCTATTGATATTGGTAATACCACTATTAATGAAAGGCTCAAGGTTGGGCACCAACACAGCCAGCCCATAAATGGATCAACATCCATCATGAAACCTGACATTCCGGTTTTTACTTCTGAAAATGGATTTGTGATTGCCTCAAGGAAAGCAATGTCCGCTGGCGAACTTGTAGAGCGCGCCAAGGTACAATTCTTAGTTACTTACTTTTATTTTCTTGCATTGCTTTCAAATAGGGGTCAAGTTGGTTGGTTGGCAATGGATAACAATAAACTCCCTTATGTTACTTCAACACCAAACCTGAATGTGAAATCGAAACAACTATTATTGTCATCATCATCGTATCCTCCACCAACAATTCTAGCTACAACCCCAGACTCAATTGGCTTGAAGAATGACATTAGTGAGATGCCTGATAATCCTCCTGGAAATACAAGCCACAAGTGCGCTCGATATGAGATTCTCACCCTCCCTGAAGATGTCAATATCGATAGTGATATTGACCCAATGGATGGCCTCTCACTTTTTGATGACACTGTCAATGAAGACTTGTTTTCCGCCTACCTCAATATGGATAAACTAAACCCATCCTCTGGAGCCCATGCTACTGCAGTAGAAAACTTTGCTATTGATATTGGTAGTTACAATATCAATGAAAGGTTCGAGGTTGGGCACCGACATAGCCAATCCATAAATGGATCAACATCCACCATCAAACCTGACATTCTAGTCTCTGCTTCTGAAATTGGCTCTATGATTGCTTCAAGGAAAGTAATGTCTGCTGCCGAACTTGTAGAGCTTGCAAAGGTTGATCCTAAGCGTGCTGAAAGGATATGGGCAAATAGACAGTCTGCTGCAAGATCAAAGGAAAAGAAGACACGTTACATTTTTGAGCTTGAAAATAAGGTTCAAAAATTGGAAACTGAAGTTACATCCTTGTCTACACAATTAACTATCTTGCAGGTATGCCTTAACTCATTATCTGTATCTTATAGGGATACACAAAGAATGGCTACTAAGAATGATGAGTTAAGGTTGCAGTTGCAAACCAAGCGACAACAACTTCAATTGCAAAATGCATTGAAGAACCCATCTGGAGAGGAAATCCGACATTTGCCACTACTAATTGGGCAAGCTATGCCAAATGGAGGACCTATGAACTCTGTTGCATTTGGATGGGGGCAACAATACTCTCCTAATACACTGGACACATATGCTCTTTTAGCAGCACAACAGTTACAACAACCTCAAAGTCATTCCCAGATGCAGCATCACCAACTTCAGTAG 2244 0.4091 MDNNKLPYVTSTPNLNVKSKQPLLSSSSYPPPTILATTPDSPSFNKDIIEMSNNSPGNTSHKRARSEILILPEDVNIDGDIDTTNSLSLFDDTVEGVLLSVYLDMYKLNSSSGGHDTIVENFAIDIGNTSINERLEVGHRHSESINGSTSIIKPDIPVSASENGSMIASRKAMSAGELVELAQVDPKHLERSQVGWLEMDNNKLPYVTSTPNLNVKSKQPLSSSSSYPPPTILATTLDSTSLNNDINEMSNNPPGNTSHKRARSEIFTLPKDINIEGDIDTMDGLSLFDDTVEEDLFSVYLNMNKLNPSSGAHDTVVEKFAIDIGNTTINERLKVGHQHSQPINGSTSIMKPDIPVFTSENGFVIASRKAMSAGELVERAKVQFLVTYFYFLALLSNRGQVGWLAMDNNKLPYVTSTPNLNVKSKQLLLSSSSYPPPTILATTPDSIGLKNDISEMPDNPPGNTSHKCARYEILTLPEDVNIDSDIDPMDGLSLFDDTVNEDLFSAYLNMDKLNPSSGAHATAVENFAIDIGSYNINERFEVGHRHSQSINGSTSTIKPDILVSASEIGSMIASRKVMSAAELVELAKVDPKRAERIWANRQSAARSKEKKTRYIFELENKVQKLETEVTSLSTQLTILQVCLNSLSVSYRDTQRMATKNDELRLQLQTKRQQLQLQNALKNPSGEEIRHLPLLIGQAMPNGGPMNSVAFGWGQQYSPNTLDTYALLAAQQLQQPQSHSQMQHHQLQ. 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01528 747 CDD bZIP_plant_RF2 593 640 IPR044759 GO:0003700|GO:0006355
Seca8g01528 747 Coils Coil 660 680 - -
Seca8g01528 747 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 590 640 IPR004827 GO:0003700|GO:0006355
Seca8g01528 747 MobiDBLite consensus disorder prediction 1 32 - -
Seca8g01528 747 Gene3D - 591 645 - -
Seca8g01528 747 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 33 191 - -
Seca8g01528 747 SUPERFAMILY Leucine zipper domain 592 646 IPR046347 GO:0003700|GO:0006355
Seca8g01528 747 Coils Coil 608 635 - -
Seca8g01528 747 SMART brlzneu 588 652 IPR004827 GO:0003700|GO:0006355
Seca8g01528 747 Pfam bZIP transcription factor 592 637 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01528 Seca-Chr8 26687755 26694950 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01528 428 729 bZIP Transcription Factor Family AT1G06070 46.875 1.06e-76 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca8g01528 bZIP_1 1.4e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01528 - - pcin:129313665 265.388