Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01527 ATGGATAAACTAAACCCATCCTCTGGAGCCCATGCTACTGCTGTAGAAAACTTTTCTATTGATATTGGTAGTACCAATTTCAATGAAAGGCTCGAGGTTGGGCATCGACATAGCCAATCCATAAATGGATCAACATCCACCATCAAACCTGACATTCCGGTCTCTGCTTCTGAAAATGGCTCTATGATTGCTTCAAGGAAAGTAATGTCCGCTGCCGAACTTGTAGAGCTTGCAAGGGTTGATCCTAAGCGTGCTGAAAGGATATGGGCAAATAGACAGTCTGCTGCAAGATCAAAGGAAAAGAAGACACGTTACATTTTTGAGCTTGAAAATAAGGTTCAAAAATTGGAAACTGAAGTTACATCCTTGTCTACACAATTAACTATCTTGCAGGTATGCCTTAACTCATTATCTGTATCTTATAGGGATACACAAAGAATGGCTACTAAGAATGATGAGTTAAGGTTGCAGTTGCAAACCAAGCGACAACAACTTCAATTGCAAAATGCATTGAAGAACCCATCTGGAGAGGAAATCCGACATTTGCCACTACTAATTGGGCAAGCTATGCCAAATGGAGGACCTATGAACTCTGTTGCATTTGGAAGGGGGCAACAATACTCTCCTAATACACTGGACACATATGCTCTTTTAGCAGCACAACAGTTACAACAACCTCAAAGTCATTCCTAG 693 0.4098 MDKLNPSSGAHATAVENFSIDIGSTNFNERLEVGHRHSQSINGSTSTIKPDIPVSASENGSMIASRKVMSAAELVELARVDPKRAERIWANRQSAARSKEKKTRYIFELENKVQKLETEVTSLSTQLTILQVCLNSLSVSYRDTQRMATKNDELRLQLQTKRQQLQLQNALKNPSGEEIRHLPLLIGQAMPNGGPMNSVAFGRGQQYSPNTLDTYALLAAQQLQQPQSHS. 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01527 230 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 81 131 IPR004827 GO:0003700|GO:0006355
Seca8g01527 230 Gene3D - 82 136 - -
Seca8g01527 230 CDD bZIP_plant_RF2 84 131 IPR044759 GO:0003700|GO:0006355
Seca8g01527 230 Pfam bZIP transcription factor 83 128 IPR004827 GO:0003700|GO:0006355
Seca8g01527 230 Coils Coil 151 171 - -
Seca8g01527 230 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 14 228 - -
Seca8g01527 230 MobiDBLite consensus disorder prediction 35 54 - -
Seca8g01527 230 SUPERFAMILY Leucine zipper domain 83 137 IPR046347 GO:0003700|GO:0006355
Seca8g01527 230 Coils Coil 99 126 - -
Seca8g01527 230 SMART brlzneu 79 143 IPR004827 GO:0003700|GO:0006355
Seca8g01527 230 MobiDBLite consensus disorder prediction 37 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01527 Seca-Chr8 26670483 26672292 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01527 29 220 bZIP Transcription Factor Family AT1G06070 53.125 1.86e-59 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca8g01527 bZIP_1 2.6e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01527 - - jre:109005463 198.364