Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01507 ATGTCGAAGATAGTATGCGTGACTGGGGGCAGTGGATGCATTGGTTCATGGCTGGTTCATCTCCTTCTGGATCGTGGATACACCATTCACGCTACCGTTCAAAATCTCAACGATGAGACCGAGACGAAGCATCTAGAAGCCCTCGAAGGAGCATCCACCCGCCTCCGCCTCTTCCAGATCGACCTCCTCCGCTACGACACCATCCTCGCCGCCGTCCGCGACTGCTCCGGCGTTTTCCACCTCGCTTCCCCTTGCATTGTCGACCAAGTCCATGACCCTCAGAATGAGCTTCTGGACCCGGCGATTAAAGGGACCGTGAACGTGCTTTCGGCTGCGAAGGAAGCTGGGGTTCAGCGCGTGGTGGTCACTTCCTCAATCTCCGCAATTTCCCCGAGCCCTAGTTGGCCTTCTGATGTTGTCAAGAGAGAGGATTGCTGGACTGACATTGAATATTGCAAGCAAAAGGGGTTGTGGTATCCAATGTCCAAGACATTGGCTGAGAAAGCTGCTTGGGATTTTGCCAAGGAGAATGGTTTGGATGTTGTGGTGGTGAATCCTGGTACTGTGATGGGCCCTGTTATTCCACCAAGGCTCAATGCAAGCATGCTCATGCTTGTTCGACTTCTTCAAGGCTGCACTGAAACATATGAGGACTTTTTTATGGGATCGGTTCACTTTAAAGATGTTGCATTGGCACATATTTTGGTGTATGAGAACAAAGCAGCAACTGGTAGACATTTGTGTGTTGAAGCTATCTCTCACTATGGTGACTTTGTGGCAAAAGTTGCTGAACTATATCCAGAATATAATGTTCCGCGGTAA 822 0.5 MSKIVCVTGGSGCIGSWLVHLLLDRGYTIHATVQNLNDETETKHLEALEGASTRLRLFQIDLLRYDTILAAVRDCSGVFHLASPCIVDQVHDPQNELLDPAIKGTVNVLSAAKEAGVQRVVVTSSISAISPSPSWPSDVVKREDCWTDIEYCKQKGLWYPMSKTLAEKAAWDFAKENGLDVVVVNPGTVMGPVIPPRLNASMLMLVRLLQGCTETYEDFFMGSVHFKDVALAHILVYENKAATGRHLCVEAISHYGDFVAKVAELYPEYNVPR. 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01507 273 Gene3D - 1 273 - -
Seca8g01507 273 Pfam NAD dependent epimerase/dehydratase family 5 244 IPR001509 -
Seca8g01507 273 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 4 271 - -
Seca8g01507 273 CDD FR_SDR_e 5 272 - -
Seca8g01507 273 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 272 IPR036291 -
Seca8g01507 273 FunFam Cinnamoyl-CoA reductase 1 1 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01507 Seca-Chr8 26145479 26148009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01507 3 273 Monolignol Biosynthesis Gene Families AT5G58490 78.598 1.02e-167 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01507 - - gmx:100803241 500.745