Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01502 ATGGGATACACTTCATTGCTTAGAAGTCCAAAGAAAGAAGAACAAGAAGTACCAGATACTATCACCCCTATACTACCCAATTCATCAAATGAAGCTTATGCTGATGAAGATTTCAATATTTTGGACGAACTTGAAGGGGTCTTGAACAGTACTACTGAGGAAGAACAAAAGTTACTACCACAAAACACTTGTAGTGGTCAGTTTCAATGGGATTTCATGGAATGGGAGAAATTCTCCCCTGTTGGAGAGGAAGCAGAGGAACATCAGGCAACAGAGAACAGAAGCAAATGCATGTTAGAGGAGCAGCAAATAATAAAGAGAGAAAATAATGATGTTGGGTTTTGGGAAGTGGATGATGAAAAGATGATGGCTTTGAATTTGAATTTGAACTATCAAGAGGTTTTGGATGCTTGGTCAGATCGTGGGTCTCTATGGGCTGATGACTGTTCTCTTTCATTGGCATCTAATAATAATGGTTACTATATGGGAGAAGTGCCAATATTGGAAGAAGAGAGAACAAGAAGGGAAGCAAGTGTTCTAAGGTACAAGGAGAAACGCCAGAACAGGTTGTTCTCAAAGAAGATAAGATACCAAGTTCGGAAATTAAACGCTGATAAAAGACCCAGAATCAAGGGTCGCTTTGTGAAGAGACATTGA 657 0.3942 MGYTSLLRSPKKEEQEVPDTITPILPNSSNEAYADEDFNILDELEGVLNSTTEEEQKLLPQNTCSGQFQWDFMEWEKFSPVGEEAEEHQATENRSKCMLEEQQIIKRENNDVGFWEVDDEKMMALNLNLNYQEVLDAWSDRGSLWADDCSLSLASNNNGYYMGEVPILEEERTRREASVLRYKEKRQNRLFSKKIRYQVRKLNADKRPRIKGRFVKRH. 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01502 218 Pfam CCT motif 175 217 IPR010402 GO:0005515
Seca8g01502 218 ProSiteProfiles CCT domain profile. 175 217 IPR010402 GO:0005515
Seca8g01502 218 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 13 217 - -
Seca8g01502 218 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01502 Seca-Chr8 26055524 26059974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01502 118 217 C2C2-CO-like Transcription Factor Family AT1G73870 46.610 2.52e-21 89.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Seca8g01502 CCT 2.2e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01502 - - gmx:100801038 311.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g01502 8 26055524 26059974 Seca8g01502 8 26055524 26059974 ECH