Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01490 ATGTACGAACGATTTCGAAACCTGTTAACTCACCCAAAGTTCTGGAGAATTGTGGGGTTTGTGTCAAGTGTCATTGGGATGCTCTGTTACGCATGGAGCCTCTCTTTCGAACATGTAGGTGAAAAGTATCACATTTTGAAGATCTCTCTATACGGTGTGGTGAGTTTCACAATCATCTTTGTTATGTTCTTTGCAAGAAAAGGGTACTTAGGCCGGTTTTCAAAGAGTTTCCTTTTGAAAGCTCTAGTTGGAGTTTTGGCTCTAATGCTAACCTCTTTATACAACTTTTTCAGCGATAAAGACTCAAACCAAAAAACAGATATTTTCAACTTGATTTCTAATGGGTCATTTGCTTTAATGTTGTTGAGCTTGTCAAAGCAAATTGACCTTGGCTTTGAATTGGAACTACTTAATTTTTACCTTGGATGTCTCACAATACAATTGATGAAGATCAACTTGGGGTTCGTTTTTGTTGGAGCAGCTTATTGTTATTTCCTCAATGTCCTTCACTCCTATTCAGATTTCAATCAAGAGATTAGAACTTCTAGTAATGAAGAACACTTGGCAATTGAAATTGACACTGCTAAGGTAGAAGAAAGAGGAGGACTTGATAATGATCAAATAGGAAAATTCTATTCAATTCTTGGAATTGAGATAAAAGATGAGGAGATACTAATGTACCCTCAAGATCTAGAAGCCAAGCTTATAGAAGCAATGGCTTCAGGTTTTGAGAAGGAGCATTGCTACCCTGTTTTCTGCAGTTGGAGAAGGCTAGTTTTAGAGGAGAAGTTATTAATAAAGAACCTCATGATGAGTATTGAAGAGGTCCAAAAGTTGCCTTTGAAATATCTCAAAGATGAAATTGAATGTTGGATCAAAGCTACCAAGGATGGTTTTATGACACTGTTTCCAAATGAAAGGCATCTATGTAACCGTGTGTTTGGATTCTCATCTCCTTTTGCTGATAGCTCTTTCATGGAGATATGTCAAGAACCAACCATTCATCTATTGAACTTTGCTAATGCTGTGGCTTGTAGTACAAGCCGGTCATCACCAGAGCGTTTGTTTAAAATAGTGCTTGTGTTTGAGACACTGAATGGACTTTTACCTGAGTTGGAGTCAATATTCTCAGGTGATTGTTGTGTGGTTCTTTGGAATGAGGCAATGAGAATTTGTAAGAGGTTAAGAGATGCAATTAGAGGAGTTTTTATTGAGCTTGAAAATCTAATTCGCCAGGATCTAGGGAAGGTTGTTGTTTGTGGTGGTGGACTTCATCCAACTAATCATTATTTGATGAATTATCTCTTTGCAGTTTGTGAATGTTGGAAGACCATTGAGGTTGCTTTTGATGATGAAGGTTCACATTCTTCTTCTTTGTCTCTCCAGGTGGGTCAGATTTTAGAGTTGTTGGAGAGCAATTTGAAAGTCAACTCCAAGATTTACAAGGACTCTTCCTTGTGCTCTATTTTCATGATGAACAATTGGAGGTACATTGTGCACAAGGTGAAAAGGTGTGAATTAGAAAGGGTGTTAGGTGATGAGTGGATACAGAAACACACAGTGAAAATGGGGCAGTACCTTGTAAACTACCAGAGAAGGGCGTGGGATGAGGTTCTTGGAATGTTGAATGTAGATAATGATGAGTCACAAGTTGTGGCAGCTTCTTCAGAGTTATGGAGAGAAAAGGTTGAGATGATTAAGATGAAATTTGAGGAGATATGTGAGATGCAGGGTACATGGGTTGTGATTGATGAGCAGATGAGACAAGTCATGAAAAGTTCCTTGAAGAAAATCTTGTTGCTGGCGTTTGAAAAGTTCAGCGCAAGATTCCAAAATGCAGTAGATCCTGAACGTGATGATATGGACATGCATGTGGATTTTGGGGTCCTTGATGTTGTGGCTCTTATAGACAAGCTGTTCCAAGGAAAAGATGAGCACAGAAACCCCAGAGTTCAGCCAACGTGGACCATAGTCCTGCCCAGTACACAGGATTTTCATGAATGGAGGAAGTACGCTGAGAAGACAATTCTTCATTCTATGTACCCAAGAAAATACTACAGGTGCATCTACAAGAATGATCAAGGTTGTCGAGCAAGAAAACACGTCCAACAAATACAAGAGAATCCAAAGATGTACACGGCTAGCTACTCTGGCTTCCATACATGCAATGTGGTCTATATGTTTCACAGGGCTCCACATGTAAATCGATAA 2211 0.3912 MYERFRNLLTHPKFWRIVGFVSSVIGMLCYAWSLSFEHVGEKYHILKISLYGVVSFTIIFVMFFARKGYLGRFSKSFLLKALVGVLALMLTSLYNFFSDKDSNQKTDIFNLISNGSFALMLLSLSKQIDLGFELELLNFYLGCLTIQLMKINLGFVFVGAAYCYFLNVLHSYSDFNQEIRTSSNEEHLAIEIDTAKVEERGGLDNDQIGKFYSILGIEIKDEEILMYPQDLEAKLIEAMASGFEKEHCYPVFCSWRRLVLEEKLLIKNLMMSIEEVQKLPLKYLKDEIECWIKATKDGFMTLFPNERHLCNRVFGFSSPFADSSFMEICQEPTIHLLNFANAVACSTSRSSPERLFKIVLVFETLNGLLPELESIFSGDCCVVLWNEAMRICKRLRDAIRGVFIELENLIRQDLGKVVVCGGGLHPTNHYLMNYLFAVCECWKTIEVAFDDEGSHSSSLSLQVGQILELLESNLKVNSKIYKDSSLCSIFMMNNWRYIVHKVKRCELERVLGDEWIQKHTVKMGQYLVNYQRRAWDEVLGMLNVDNDESQVVAASSELWREKVEMIKMKFEEICEMQGTWVVIDEQMRQVMKSSLKKILLLAFEKFSARFQNAVDPERDDMDMHVDFGVLDVVALIDKLFQGKDEHRNPRVQPTWTIVLPSTQDFHEWRKYAEKTILHSMYPRKYYRCIYKNDQGCRARKHVQQIQENPKMYTASYSGFHTCNVVYMFHRAPHVNR. 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01490 736 Gene3D WRKY domain 656 724 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca8g01490 736 SUPERFAMILY WRKY DNA-binding domain 660 724 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca8g01490 736 Pfam Exo70 exocyst complex subunit 290 615 IPR046364 GO:0000145|GO:0005546|GO:0006887
Seca8g01490 736 PANTHER EXOCYST COMPLEX PROTEIN EXO70 228 642 IPR004140 GO:0000145|GO:0006887
Seca8g01490 736 SMART WRKY_cls 662 724 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca8g01490 736 ProSiteProfiles WRKY domain profile. 664 725 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca8g01490 736 Gene3D Exocyst complex component Exo70 184 650 - -
Seca8g01490 736 Pfam WRKY DNA -binding domain 664 723 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca8g01490 736 SUPERFAMILY Cullin repeat-like 235 640 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01490 Seca-Chr8 25681749 25686597 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01490 230 647 EXO70 exocyst subunit family AT5G58430 48.349 1.78e-119 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Seca8g01490 Exo70 1.8e-80 CL0295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01490 K07195 - aprc:113848528 1023.85