Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01489 ATGTCTGAAAACGGAGAAGAGAAATTACTGGCTGTAGCCCGGCACATAGCGAAAACGCTGGGCCACAACAACAACATGGCTGATGATATTCTCCAAATATTCTCCAACTTTGATGGAAGGTTCTCGAAGGAGAACCTCTCTGAGAAGGTTGTAGATGCAGATCCCAGGGCCTGCGCCGCACTGGATCACTCCCTCAAAACCCTTGACCGCCGTATCTCTCACTACGTCTCTTCCGATCGTCCCATCTGGGCTGACTCCGCTGATGCTGCCGCCTTCCTCGACACCGTCGACGACGTTGTTGCTGCCGTCGCCGAATGGAACCATCTCGCCGGAGACAAGTCCGTCGGCGCGTTACTCATCCGCGCCGAGGAAATGCTCCAGCACGCCATGTTCCGCCTCGAGGACGAGTTCCGGTCACTCATGGAGCGCGGTGGCGAGTCATTCGACCTCACCCGGCCGTACCGGAGCGGCGAGTCAACGGAGAACTTACCGTTTGACTCGGAGGAAGAAGAGGACGAAGAAATCGACGACCAAGCAAGGAACGGAGAACATGAGGACCAGATTCCCGTGGCGATGCCGGTTACCGACTACGACATCGTTATCGACGCGCTGCCGTCGGGGACGATCAACGACCTTCACGAGATCGCGAAGCGTATGGTGGCCGGAGGGTTCGGGAAGGAGTGCTCTCACGTGTACAGTAGTTGCCGGAGAGAGTTCTTGGAGGAAAGCCTCTCGAGATTAGGGTTACAGAAACTCAGCATCGAGGACGTTCACAAGATGTCATGGCAGGATCTCGAAGACGAGATCGAAAGATGGATTAAGGCTTCCAATGTCGCTCTCAAGATACTTTTCCCAAGCGAGCGGCGACTCTGCGATCGCGTCTTCTTCGGATTCTCCTCCGCCGCTGATTTCTCCTTCATGGAGGTTTGCAGGGGATCCACCATTCAGTTGCTGAATTTCGCTGATGCCGTTGCAATCGGGAGCCGTTCGCCGGAGCGATTGTTTAGAATCCTCGACCTGTTTGAAACATTGCGTGACCTAATTCCTGAGTTTGAGTCTCTGTTTTGTGATCAGTACAGTGTGTCGCTCAGGAATGAAGCAATCACGATTTGGAAGAGATTGGGAGAAGCAATTAGGGGCATTTTCATGGAGTTGGAGAATCTGATTCGCCGCGATCCGGCTAAGTCGGCGGTTCCCGGTGGTGGGCTTCACCCCATTACCCGTTACGTGATGAACTACCTCCGTGCTGCTTGCCGTTCACGGCAGACTCTAGAGCAAGTGTTTGAAGAATACCCTAAGCTTGATGATAGAGTAGCACACTCTTCCTCTCTCTCAGTGCAGATGGATTGGATTATGGAGCTATTGGAGAGCAATTTGGAAGCAAAGTCCAAAATCTACAAGGACCCTGCTTTGTGCTATGTTTTCTTGATGAATAATGGCAGGTACATAGTTCAAAAAAGCAAAGATAGTGAATTGGGAACCCTTTTGGGGGATGATTGGATCCGAAAACACACTGCAAAAGTTCGGCAATACCATGTACACTATCAAAGAAGCTCATGGAATAAGGTGCTGGGGATTCTGAAATTGGACAGCAATGGACCAGTGCCGCCTAATGCGGTGGCGAAGTCAATGAAAGAGAAGCTCAAGTCGTTTAACATGCTGTTTGAGGATATATGCAGGGTTCAGTCTTCATGGTTTGTCTTTGATGAGCAGCTCAGGGAAGAAATAAGAATTTCCCTTGAGAAAATCTTGTTGCCAGCTTATGGAAACTTCATTGGGAGGTTCCAGAGTGTTCCGGAACTTGGTAAGCATGCTGATAAGTATATTAAGTATGGAACGGAGGGGATTGAAGCAAGACTCAATGATTTATTTCAGGGAAGCAGTGGATCAACTGGTAGCCGAAAGTGA 1908 0.5052 MSENGEEKLLAVARHIAKTLGHNNNMADDILQIFSNFDGRFSKENLSEKVVDADPRACAALDHSLKTLDRRISHYVSSDRPIWADSADAAAFLDTVDDVVAAVAEWNHLAGDKSVGALLIRAEEMLQHAMFRLEDEFRSLMERGGESFDLTRPYRSGESTENLPFDSEEEEDEEIDDQARNGEHEDQIPVAMPVTDYDIVIDALPSGTINDLHEIAKRMVAGGFGKECSHVYSSCRREFLEESLSRLGLQKLSIEDVHKMSWQDLEDEIERWIKASNVALKILFPSERRLCDRVFFGFSSAADFSFMEVCRGSTIQLLNFADAVAIGSRSPERLFRILDLFETLRDLIPEFESLFCDQYSVSLRNEAITIWKRLGEAIRGIFMELENLIRRDPAKSAVPGGGLHPITRYVMNYLRAACRSRQTLEQVFEEYPKLDDRVAHSSSLSVQMDWIMELLESNLEAKSKIYKDPALCYVFLMNNGRYIVQKSKDSELGTLLGDDWIRKHTAKVRQYHVHYQRSSWNKVLGILKLDSNGPVPPNAVAKSMKEKLKSFNMLFEDICRVQSSWFVFDEQLREEIRISLEKILLPAYGNFIGRFQSVPELGKHADKYIKYGTEGIEARLNDLFQGSSGSTGSRK. 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01489 635 Gene3D Exocyst complex component Exo70 81 634 - -
Seca8g01489 635 Pfam Exo70 exocyst complex subunit 270 622 IPR046364 GO:0000145|GO:0005546|GO:0006887
Seca8g01489 635 PANTHER EXOCYST COMPLEX PROTEIN EXO70 60 626 IPR004140 GO:0000145|GO:0006887
Seca8g01489 635 SUPERFAMILY Cullin repeat-like 83 624 IPR016159 -
Seca8g01489 635 MobiDBLite consensus disorder prediction 148 182 - -
Seca8g01489 635 MobiDBLite consensus disorder prediction 163 179 - -
Seca8g01489 635 FunFam Exocyst subunit Exo70 family protein 75 632 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01489 Seca-Chr8 25671598 25673526 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01489 1 628 EXO70 exocyst subunit family AT5G58430 70.541 0.0 906
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01489 K07195 - gmx:100803694 1078.16