Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01487 ATGAAGAATGGTGAAGCCACCCATGATGATTTATTAGGCATACTTTTGGAATCAAATCACTTTGAAAATCAAGGACGTGATGGTGGAATGACTAACCAAGAAGTAATTCAAGAATGCAAACTATTTTACATTGCGGGGCAAGAGAGCACTTCATCGTTGCTGGTTTGGACAATGGTATTATTGGCTAGGTATCCTGAATGGCAAGCACGTGTAAGGCAGGAAGTTTTGCAAGTTTTTGGCAACCAAATTCCAAACTTTAATGGGTTAAGTCACCTTAAAATTATGACCATGGTCTTATACGAGGTTCTCAGGTTATATCCACCTACAGTTTACTTCACTCGAGCTGTTCAAAAGGATTTAAAACTTGGAAACCTATCATTACCTGCAGGAATACAAGTTTCCATACCAATACTTTTGATTCACCATGATCGTGATATATGGGGTGATGATGCAATGGAGTTCAAACCTGAAAGATTCTCTGAAGGAATTGCAAAGGCCACGAAAGGTCAAGTTTCATATTTTCCATTTGGATGGGGTCCTAGAATATGTATTGGGCAAAACTTTGCCTTATTGGAAGCTAAAATAGTTTTGTCATTGCTTCTGCAAAATTTCTCATTTGAGATTTCTGCAGCCTATGAACATGCTCCTAAAATTGTGCTTTCTTTGCAGCCAAAACATGGGGTGAAACTCATTTTGCATAAATTGTAA 708 0.3799 MKNGEATHDDLLGILLESNHFENQGRDGGMTNQEVIQECKLFYIAGQESTSSLLVWTMVLLARYPEWQARVRQEVLQVFGNQIPNFNGLSHLKIMTMVLYEVLRLYPPTVYFTRAVQKDLKLGNLSLPAGIQVSIPILLIHHDRDIWGDDAMEFKPERFSEGIAKATKGQVSYFPFGWGPRICIGQNFALLEAKIVLSLLLQNFSFEISAAYEHAPKIVLSLQPKHGVKLILHKL. 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01487 235 PANTHER CYTOCHROME P450 FAMILY MEMBER 4 227 - -
Seca8g01487 235 PRINTS E-class P450 group I signature 54 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g01487 235 PRINTS E-class P450 group I signature 173 183 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g01487 235 PRINTS E-class P450 group I signature 34 51 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g01487 235 PRINTS E-class P450 group I signature 183 206 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g01487 235 Pfam Cytochrome P450 6 210 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g01487 235 Gene3D Cytochrome P450 1 235 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g01487 235 PRINTS P450 superfamily signature 183 194 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g01487 235 PRINTS P450 superfamily signature 45 62 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g01487 235 PRINTS P450 superfamily signature 97 108 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g01487 235 PRINTS P450 superfamily signature 174 183 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g01487 235 SUPERFAMILY Cytochrome P450 3 233 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g01487 235 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 176 185 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01487 Seca-Chr8 25614883 25615679 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01487 2 235 Cytochrome P450 AT3G14680 61.538 1.31e-109 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01487 - K17873 gmx:100790445 382.874