Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01482 ATGGTTTTGTTCGCAAAGATATGGCAACACTCTAGAAGTCTCCGGTTCAAAGCTAATTGGGCATTTATGGTTTTGACGATCACATCGGTCTATTCCTTTTTCTCCGATAAAGTGATGAATGGGAAACCAGATGCATATAGCCTAATTTTTTGTGCTGCCTTTGCTATTATGTCACTTAGCCTGTCGAGGCAAACTGAATGTGGATTCGAAGTGGATTTTCTCTATTTTTTTCTCGGATGTTTAATCGTACAGCTCATGAAGATTAGATTTGAGTTGGTTATTGTGGGTGCAGGTTTCAGTTATTCCCTCATTATTCTTCGTTCTTACTTTTCTTTGATAGATGTCGCACTGCAAAATGAGTATGTTGGACTCCAAGATGAACATTCTGTAGTCGTTGAAATCCATTCACCACAACTGCCAATTATTGCTAGTATGATGCAACAGCTCACATCTTGTGTGAAGGCGCTTCAACTGGAAAATTCGAATCTCATCGACATGTTTTTGGAGCAGGCGAAGGAATACTTTGAAGGTAACTCTGAACTAGCAGTAACCGACCATAACTTCATCATCGATGCGCTGCCGTCGGGAAGGATCAACGATCTTCACGAAACCGCCAAGTTGATGATACTATTTCCTGGTGAGCGACGACTCTGCGATCATGTCTGTTTGGGATTCTCCTCTGCCGCAGATCGTTGTTTCACAGAGGTTTGCAAGGGAGCCACGATTCACCTGCTGAATTTTGCTGATACTGTTGCCGGTGGGAGCCCTTCAGTGAGCCGTTTGTTCCCAATGGTCGACGTGTTTCAGACACTGCATGATCTAATTCCCCAATTCCAATCATTGTTTCCCGATTCGTTGGTGAATGAAGCAATCGCAGTTTATAACAGATTGGGAGAAGCAAGCAGAGACGTTTTCATCGAATTAGACAATCTGGTTTTCCGTATCCCAGAGGCTAAGCTAATTGCCCCAGCCGATGGCGGTTATCATCCAATGATGGATAACATCATCAATCACCTCATCTCTGCTTGCAGGTCACGGCAGATCCTGGAGCAAATTTTACAAGATTACCCCAAGGATGCCAATGAAGTTGGAACATCTTCTATATTCACAGCGAAGATGAAGAACATAATGGAACTGTTAGAGAGAGAATTGGAAGCGAAGTCCAAAATCTACAGTGTTCCTGCTTTGCGCTATATTTTTATAATGAATAATCGGAAGCGCATAGAAATGATGGATGAAATACCCCAATTGAGAACCATTACTGGCAATGACTGGTTCGTAAAAACAGGGCAAAAGTCCAATACAATTTTGAACTCTATCAAAGAAGCTCATGTAACAAGTTGCTTAAGTTTTTGA 1356 0.4211 MVLFAKIWQHSRSLRFKANWAFMVLTITSVYSFFSDKVMNGKPDAYSLIFCAAFAIMSLSLSRQTECGFEVDFLYFFLGCLIVQLMKIRFELVIVGAGFSYSLIILRSYFSLIDVALQNEYVGLQDEHSVVVEIHSPQLPIIASMMQQLTSCVKALQLENSNLIDMFLEQAKEYFEGNSELAVTDHNFIIDALPSGRINDLHETAKLMILFPGERRLCDHVCLGFSSAADRCFTEVCKGATIHLLNFADTVAGGSPSVSRLFPMVDVFQTLHDLIPQFQSLFPDSLVNEAIAVYNRLGEASRDVFIELDNLVFRIPEAKLIAPADGGYHPMMDNIINHLISACRSRQILEQILQDYPKDANEVGTSSIFTAKMKNIMELLERELEAKSKIYSVPALRYIFIMNNRKRIEMMDEIPQLRTITGNDWFVKTGQKSNTILNSIKEAHVTSCLSF. 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01482 451 Pfam Exo70 exocyst complex subunit 207 442 IPR046364 GO:0000145|GO:0005546|GO:0006887
Seca8g01482 451 PANTHER EXOCYST COMPLEX PROTEIN EXO70 197 432 IPR004140 GO:0000145|GO:0006887
Seca8g01482 451 SUPERFAMILY Cullin repeat-like 160 440 IPR016159 -
Seca8g01482 451 Gene3D Exocyst complex component Exo70 207 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01482 Seca-Chr8 25460939 25462486 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01482 207 408 EXO70 exocyst subunit family AT5G58430 53.365 1.04e-62 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01482 - - tpra:123923139 361.688